RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 CEP128Q6ZU80 1094 aa11.67□□□□□ -0.54
CMSS1-205ENST00000489081 CENPUQ71F23 418 aa11.67□□□□□ -0.54
CMSS1-205ENST00000489081 METTL3Q86U44 580 aaKnown RBP11.67□□□□□ -0.54
CMSS1-205ENST00000489081 CAND1Q86VP6 1230 aaKnown RBP11.67□□□□□ -0.54
CMSS1-205ENST00000489081 CCDC25Q86WR0 208 aa11.67□□□□□ -0.54
CMSS1-205ENST00000489081 RELL1Q8IUW5 271 aa11.67□□□□□ -0.54
CMSS1-205ENST00000489081 PHTF2Q8N3S3 785 aa11.67□□□□□ -0.54
CMSS1-205ENST00000489081 SLC39A7Q92504 469 aa11.67□□□□□ -0.54
CMSS1-205ENST00000489081 CHFRQ96EP1 664 aa11.67□□□□□ -0.54
CMSS1-205ENST00000489081 SERPINB12Q96P63 405 aa11.67□□□□□ -0.54
CMSS1-205ENST00000489081 SEMA3CQ99985 751 aa11.67□□□□□ -0.54
CMSS1-205ENST00000489081 BRD9Q9H8M2 597 aa11.67□□□□□ -0.54
CMSS1-205ENST00000489081 LRRC40Q9H9A6 602 aa11.67□□□□□ -0.54
CMSS1-205ENST00000489081 XAB2Q9HCS7 855 aaKnown RBP11.67□□□□□ -0.54
CMSS1-205ENST00000489081 GOLGA6AQ9NYA3 693 aa11.67□□□□□ -0.54
CMSS1-205ENST00000489081 UBP1Q9NZI7 540 aa11.67□□□□□ -0.54
CMSS1-205ENST00000489081 DEC1Q9P2X7 70 aa11.67□□□□□ -0.54
CMSS1-205ENST00000489081 METRNQ9UJH8 293 aa11.67□□□□□ -0.54
CMSS1-205ENST00000489081 HS3ST2Q9Y278 367 aa11.67□□□□□ -0.54
CMSS1-205ENST00000489081 FCF1Q9Y324 198 aaKnown RBP11.67□□□□□ -0.54
CMSS1-205ENST00000489081 REV3LO60673 3130 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 TTC24A2A3L6 582 aaPredicted RBP11.66□□□□□ -0.54
CMSS1-205ENST00000489081 ALOX15BO15296 676 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 SMAD6O43541 496 aaKnown RBP11.66□□□□□ -0.54
CMSS1-205ENST00000489081 GJB3O75712 270 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 MLNP12872 115 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 SRCP12931 536 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 CES1P23141 567 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 ADRA1AP35348 466 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 EIF2DP41214 584 aaKnown RBP11.66□□□□□ -0.54
CMSS1-205ENST00000489081 CD86P42081 329 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 STK19P49842 368 aaPredicted RBP11.66□□□□□ -0.54
CMSS1-205ENST00000489081 PMS2P54278 862 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 WNT3AP56704 352 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 RHOAP61586 193 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 ECT2LQ008S8 904 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 NSUN2Q08J23 767 aaKnown RBP eCLIP11.66□□□□□ -0.54
CMSS1-205ENST00000489081 MESP2Q0VG99 397 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 OLIG2Q13516 323 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 SLC14A2Q15849 920 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 AAK1Q2M2I8 961 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 MSS51Q4VC12 460 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 NAIF1Q69YI7 327 aaPredicted RBP11.66□□□□□ -0.54
CMSS1-205ENST00000489081 LRRC8BQ6P9F7 803 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 PDIK1LQ8N165 341 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 SH2D3CQ8N5H7 860 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 ATP11CQ8NB49 1132 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 IPMKQ8NFU5 416 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 TTC8Q8TAM2 541 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 NXPE3Q969Y0 559 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 EXOC2Q96KP1 924 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 RPL10LQ96L21 214 aaKnown RBP11.66□□□□□ -0.54
CMSS1-205ENST00000489081 MRGPRX2Q96LB1 330 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 NSMCE3Q96MG7 304 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 NUDCD1Q96RS6 583 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 SAYSD1Q9NPB0 183 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 CASS4Q9NQ75 786 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 VPS45Q9NRW7 570 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 ZNF446Q9NWS9 450 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 LIMD1Q9UGP4 676 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 SLC25A13Q9UJS0 675 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 SHROOM3Q8TF72 1996 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 BRWD1Q9NSI6 2320 aa11.66□□□□□ -0.54
CMSS1-205ENST00000489081 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.65□□□□□ -0.54
CMSS1-205ENST00000489081 PRRT4C9JH25 899 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 INSIG1O15503 277 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 USP12O75317 370 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 AVILO75366 819 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 PMPCBO75439 489 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 BANF1O75531 89 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 ZNF821O75541 412 aaPredicted RBP11.65□□□□□ -0.54
CMSS1-205ENST00000489081 ASLP04424 464 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 MAGEA4P43358 317 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 PDIA2Q13087 525 aaKnown RBP11.65□□□□□ -0.54
CMSS1-205ENST00000489081 MTM1Q13496 603 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 CASP8Q14790 479 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 FASTKD3Q14CZ7 662 aaKnown RBP11.65□□□□□ -0.54
CMSS1-205ENST00000489081 UAP1Q16222 522 aaPredicted RBP11.65□□□□□ -0.54
CMSS1-205ENST00000489081 BBS9Q3SYG4 887 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 DNAJC21Q5F1R6 531 aaKnown RBP11.65□□□□□ -0.54
CMSS1-205ENST00000489081 RALGPS1Q5JS13 557 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 DGKKQ5KSL6 1271 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 SPDYCQ5MJ68 293 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 NAPEPLDQ6IQ20 393 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 PTCRAQ6ISU1 281 aaPredicted RBP11.65□□□□□ -0.54
CMSS1-205ENST00000489081 TRMT10CQ7L0Y3 403 aaKnown RBP11.65□□□□□ -0.54
CMSS1-205ENST00000489081 LINC00523Q86TU6 105 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 RNF135Q8IUD6 432 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 AGGF1Q8N302 714 aaeCLIP11.65□□□□□ -0.54
CMSS1-205ENST00000489081 TERB1Q8NA31 727 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 OR52K1Q8NGK4 314 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 ISG20Q96AZ6 181 aaKnown RBP11.65□□□□□ -0.54
CMSS1-205ENST00000489081 MRGPRX3Q96LB0 322 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 TBL1YQ9BQ87 522 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 APOL2Q9BQE5 337 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 WDR83Q9BRX9 315 aaKnown RBP11.65□□□□□ -0.54
CMSS1-205ENST00000489081 FICDQ9BVA6 458 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 FUT8Q9BYC5 575 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 TM6SF2Q9BZW4 377 aa11.65□□□□□ -0.54
CMSS1-205ENST00000489081 CIPCQ9C0C6 399 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms