RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 CADM1Q9BY67 442 aaKnown RBP2.8□□□□□ -1.96
CCDC93-209ENST00000488908 FBRSL1Q9HCM7 1045 aaKnown RBP2.8□□□□□ -1.96
CCDC93-209ENST00000488908 PDE11AQ9HCR9 933 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 STARD7Q9NQZ5 370 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 VDAC3Q9Y277 283 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 A0A096LPK6 155 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 AGAP5A6NIR3 686 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 KDM4BO94953 1096 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 DHRS4L1P0CG22 281 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 HARSP12081 509 aaKnown RBP2.79□□□□□ -1.96
CCDC93-209ENST00000488908 MCM3P25205 808 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 ALDH4A1P30038 563 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 DCTDP32321 178 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 PRIM2P49643 509 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 PMS2P11Q13670 270 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 TNFAIP1Q13829 316 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 KRT72Q14CN4 511 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 GXYLT1Q4G148 440 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 FAM69BQ5VUD6 431 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 ARHGAP11AQ6P4F7 1023 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 MYO1HQ8N1T3 1032 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 CIARTQ8N365 385 aaPredicted RBP2.79□□□□□ -1.96
CCDC93-209ENST00000488908 MAPK1IP1LQ8NDC0 245 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 LNX1Q8TBB1 728 aaPredicted RBP2.79□□□□□ -1.96
CCDC93-209ENST00000488908 HMGB4Q8WW32 186 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 TRIB2Q92519 343 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 PTPRHQ9HD43 1115 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 LIN7CQ9NUP9 197 aaKnown RBP2.79□□□□□ -1.96
CCDC93-209ENST00000488908 ZNF224Q9NZL3 707 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 POU2F3Q9UKI9 436 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 PCDHA10Q9Y5I2 948 aa2.79□□□□□ -1.96
CCDC93-209ENST00000488908 GRM8O00222 908 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 HNRNPDLO14979 420 aaKnown RBP2.78□□□□□ -1.96
CCDC93-209ENST00000488908 CCNT1O60563 726 aaKnown RBP2.78□□□□□ -1.96
CCDC93-209ENST00000488908 NPPBP16860 134 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 MYF6P23409 242 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 YWHAQP27348 245 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 LINC01547P58512 204 aaPredicted RBP2.78□□□□□ -1.96
CCDC93-209ENST00000488908 IGBP1P78318 339 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 CDK18Q07002 472 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 RAB30Q15771 203 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 SLC35G1Q2M3R5 365 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 HIBCHQ6NVY1 386 aaPredicted RBP2.78□□□□□ -1.96
CCDC93-209ENST00000488908 AADACL2Q6P093 401 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 KIAA1324Q6UXG2 1013 aaKnown RBP2.78□□□□□ -1.96
CCDC93-209ENST00000488908 ZNF497Q6ZNH5 498 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 KCNH5Q8NCM2 988 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 FIG4Q92562 907 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 KCNJ9Q92806 393 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 ZNF566Q969W8 418 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 TTC17Q96AE7 1141 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 LRFN5Q96NI6 719 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 TM7SF3Q9NS93 570 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 OBP2AQ9NY56 170 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 SIX4Q9UIU6 781 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 ZNF711Q9Y462 761 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 SNX9Q9Y5X1 595 aa2.78□□□□□ -1.96
CCDC93-209ENST00000488908 hDV102S1A0JD36 115 aa2.77□□□□□ -1.97
CCDC93-209ENST00000488908 TIPRLO75663 272 aa2.77□□□□□ -1.97
CCDC93-209ENST00000488908 CLDN14O95500 239 aa2.77□□□□□ -1.97
CCDC93-209ENST00000488908 PRSS1P07477 247 aa2.77□□□□□ -1.97
CCDC93-209ENST00000488908 LINC00271P0C7V0 271 aa2.77□□□□□ -1.97
CCDC93-209ENST00000488908 EEF1GP26641 437 aaKnown RBP2.77□□□□□ -1.97
CCDC93-209ENST00000488908 SKIV2L2P42285 1042 aaKnown RBP2.77□□□□□ -1.97
CCDC93-209ENST00000488908 FUT6P51993 359 aa2.77□□□□□ -1.97
CCDC93-209ENST00000488908 SREBF2Q12772 1141 aa2.77□□□□□ -1.97
CCDC93-209ENST00000488908 PPIGQ13427 754 aaKnown RBP eCLIP2.77□□□□□ -1.971e-14■□□□□ 10.6
CCDC93-209ENST00000488908 TBRG1Q3YBR2 411 aa2.77□□□□□ -1.97
CCDC93-209ENST00000488908 TBC1D9BQ66K14 1250 aa2.77□□□□□ -1.97
CCDC93-209ENST00000488908 CCDC129Q6ZRS4 1044 aa2.77□□□□□ -1.97
CCDC93-209ENST00000488908 ZNF248Q8NDW4 579 aa2.77□□□□□ -1.97
CCDC93-209ENST00000488908 DMBX1Q8NFW5 382 aa2.77□□□□□ -1.97
CCDC93-209ENST00000488908 C2CD4CQ8TF44 421 aa2.77□□□□□ -1.97
CCDC93-209ENST00000488908 F2RL3Q96RI0 385 aa2.77□□□□□ -1.97
CCDC93-209ENST00000488908 LITAFQ99732 161 aa2.77□□□□□ -1.97
CCDC93-209ENST00000488908 SLC7A10Q9NS82 523 aa2.77□□□□□ -1.97
CCDC93-209ENST00000488908 SLC22A11Q9NSA0 550 aa2.77□□□□□ -1.97
CCDC93-209ENST00000488908 OR6C3Q9NZP0 311 aa2.77□□□□□ -1.97
CCDC93-209ENST00000488908 TAAR2Q9P1P5 351 aa2.77□□□□□ -1.97
CCDC93-209ENST00000488908 MORC2Q9Y6X9 1032 aaPredicted RBP2.77□□□□□ -1.97
CCDC93-209ENST00000488908 CGNL1Q0VF96 1302 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 A0A0G2JPF8 293 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 A0A1W2PS18 150 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 CPED1A4D0V7 1026 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 NPIPB13A6NJU9 1138 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 NPIPB5A8MRT5 1133 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 HNRNPCL3B7ZW38 293 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 NPIPB4C9JG80 1138 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 J3KR12 359 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 HNRNPCL1O60812 293 aaKnown RBP2.76□□□□□ -1.97
CCDC93-209ENST00000488908 FGF18O76093 207 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 HNRNPCL4P0DMR1 293 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 GYS1P13807 737 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 FAM27E3Q08E93 113 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 IFIT5Q13325 482 aaKnown RBP2.76□□□□□ -1.97
CCDC93-209ENST00000488908 LPAL2Q16609 132 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 ZC2HC1BQ5TFG8 222 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 GTSCR1Q86UQ5 136 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 SCN4BQ8IWT1 228 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 GALNT15Q8N3T1 639 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms