RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 TSPY26PQ9H489 355 aa18.04■□□□□ 0.48
ITGB1-215ENST00000488494 GDF3Q9NR23 364 aa18.04■□□□□ 0.48
ITGB1-215ENST00000488494 A0A087X0T9 212 aa18.03■□□□□ 0.48
ITGB1-215ENST00000488494 A0A1B0GTQ1 180 aa18.03■□□□□ 0.48
ITGB1-215ENST00000488494 PRAMEF26H0Y7S4 382 aa18.03■□□□□ 0.48
ITGB1-215ENST00000488494 TLR4O00206 839 aa18.03■□□□□ 0.48
ITGB1-215ENST00000488494 SLC31A1O15431 190 aa18.03■□□□□ 0.48
ITGB1-215ENST00000488494 HYAL3O43820 417 aaPredicted RBP18.03■□□□□ 0.48
ITGB1-215ENST00000488494 PCDHGA12O60330 932 aa18.03■□□□□ 0.48
ITGB1-215ENST00000488494 PCDH8O95206 1070 aa18.03■□□□□ 0.48
ITGB1-215ENST00000488494 UGT2B4P06133 528 aa18.03■□□□□ 0.48
ITGB1-215ENST00000488494 FAM228BP0C875 321 aa18.03■□□□□ 0.48
ITGB1-215ENST00000488494 RHOAP61586 193 aa18.03■□□□□ 0.48
ITGB1-215ENST00000488494 SNRPD1P62314 119 aaKnown RBP18.03■□□□□ 0.48
ITGB1-215ENST00000488494 SUZ12Q15022 739 aaKnown RBP18.03■□□□□ 0.48
ITGB1-215ENST00000488494 NFKBIBQ15653 356 aa18.03■□□□□ 0.48
ITGB1-215ENST00000488494 PRAMEF14Q5SWL7 426 aa18.03■□□□□ 0.48
ITGB1-215ENST00000488494 NEK5Q6P3R8 708 aa18.03■□□□□ 0.48
ITGB1-215ENST00000488494 FBXL19Q6PCT2 694 aa18.03■□□□□ 0.48
ITGB1-215ENST00000488494 PLPP6Q8IY26 295 aa18.03■□□□□ 0.48
ITGB1-215ENST00000488494 BAHD1Q8TBE0 780 aaPredicted RBP18.03■□□□□ 0.48
ITGB1-215ENST00000488494 CASKIN2Q8WXE0 1202 aa18.03■□□□□ 0.48
ITGB1-215ENST00000488494 LRRC19Q9H756 370 aa18.03■□□□□ 0.48
ITGB1-215ENST00000488494 FZD3Q9NPG1 666 aa18.03■□□□□ 0.48
ITGB1-215ENST00000488494 ZFR2Q9UPR6 939 aaKnown RBP18.03■□□□□ 0.48
ITGB1-215ENST00000488494 SPEGQ15772 3267 aa18.03■□□□□ 0.48
ITGB1-215ENST00000488494 DAPK3O43293 454 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 DFNA5O60443 496 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 IGSF6O95976 241 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 FTH1P19P0C7X4 201 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 TCF4P15884 667 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 GRK6P43250 576 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 SMTNL2Q2TAL5 461 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 MYLK3Q32MK0 819 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 INAVAQ3KP66 663 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 TMEM259Q4ZIN3 620 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 PSTKQ8IV42 348 aaKnown RBP18.02■□□□□ 0.48
ITGB1-215ENST00000488494 NPWQ8N729 165 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 MFSD2AQ8NA29 543 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 TMEM145Q8NBT3 493 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 RNF214Q8ND24 703 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 RHBDD1Q8TEB9 315 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 EXOC2Q96KP1 924 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 NUP85Q9BW27 656 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 SCNM1Q9BWG6 230 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 PDFQ9HBH1 243 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 DONSONQ9NYP3 566 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 UBA2Q9UBT2 640 aaPredicted RBP18.02■□□□□ 0.48
ITGB1-215ENST00000488494 ITM2BQ9Y287 266 aa18.02■□□□□ 0.48
ITGB1-215ENST00000488494 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.02■□□□□ 0.48
ITGB1-215ENST00000488494 TPRP12270 2363 aaKnown RBP18.02■□□□□ 0.47
ITGB1-215ENST00000488494 CBFA2T2O43439 604 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 IL1R2P27930 398 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 AKT2P31751 481 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 PCK1P35558 622 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 ABL2P42684 1182 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 NDST2P52849 883 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 MAPK8IP2Q13387 824 aaPredicted RBP18.01■□□□□ 0.47
ITGB1-215ENST00000488494 STAT4Q14765 748 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 SHBQ15464 509 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 INO80DQ53TQ3 878 aaPredicted RBP18.01■□□□□ 0.47
ITGB1-215ENST00000488494 ZNF805Q5CZA5 627 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 SPECC1LQ69YQ0 1117 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 DBX2Q6ZNG2 339 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 GLRX5Q86SX6 157 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 IQCHQ86VS3 1027 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 SPATS2Q86XZ4 545 aaKnown RBP18.01■□□□□ 0.47
ITGB1-215ENST00000488494 GATAD2AQ86YP4 633 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 VOPP1Q96AW1 172 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 ARHGEF26Q96DR7 871 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 LRIG1Q96JA1 1093 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 BTBD6Q96KE9 485 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 OSBPL1AQ9BXW6 950 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 ZWILCHQ9H900 591 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.01■□□□□ 0.47
ITGB1-215ENST00000488494 LHX3Q9UBR4 397 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 ANAPC7Q9UJX3 599 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 FADS3Q9Y5Q0 445 aa18.01■□□□□ 0.47
ITGB1-215ENST00000488494 C16orf96A6NNT2 1141 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 J3KR12 359 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 YKT6O15498 198 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 AP1G1O43747 822 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 PRAMEF11O60813 436 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 POP4O95707 220 aaKnown RBP18■□□□□ 0.47
ITGB1-215ENST00000488494 CYP1A2P05177 515 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 ERCC2P18074 760 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 HNRNPA2B1P22626 353 aaKnown RBP18■□□□□ 0.47
ITGB1-215ENST00000488494 EPHA8P29322 1005 aaPredicted RBP18■□□□□ 0.47
ITGB1-215ENST00000488494 ARRB1P49407 418 aaPredicted RBP18■□□□□ 0.47
ITGB1-215ENST00000488494 PAPOLAP51003 745 aaKnown RBP18■□□□□ 0.47
ITGB1-215ENST00000488494 OVGP1Q12889 678 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 DPYSQ14117 519 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 TRIM14Q14142 442 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 LRRC73Q5JTD7 316 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 KIAA1161Q6NSJ0 714 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 ALKBH5Q6P6C2 394 aaKnown RBP18■□□□□ 0.47
ITGB1-215ENST00000488494 ARHGAP12Q8IWW6 846 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 PNPLA1Q8N8W4 532 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 HSPH1Q92598 858 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 KLHL32Q96NJ5 620 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms