RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 ZNF883P0CG24 379 aa24.1■■□□□ 1.45
RNF38-208ENST00000488058 ADRB3P13945 408 aa24.1■■□□□ 1.45
RNF38-208ENST00000488058 TCF4P15884 667 aa24.1■■□□□ 1.45
RNF38-208ENST00000488058 PRLRP16471 622 aa24.1■■□□□ 1.45
RNF38-208ENST00000488058 ERCC2P18074 760 aa24.1■■□□□ 1.45
RNF38-208ENST00000488058 IL1R2P27930 398 aa24.1■■□□□ 1.45
RNF38-208ENST00000488058 HNRNPH3P31942 346 aaKnown RBP24.1■■□□□ 1.45
RNF38-208ENST00000488058 SSR1P43307 286 aaKnown RBP24.1■■□□□ 1.45
RNF38-208ENST00000488058 CCT8P50990 548 aa24.1■■□□□ 1.45
RNF38-208ENST00000488058 NDST2P52849 883 aa24.1■■□□□ 1.45
RNF38-208ENST00000488058 FAM193AP78312 1265 aa24.1■■□□□ 1.45
RNF38-208ENST00000488058 IL9RQ01113 521 aa24.1■■□□□ 1.45
RNF38-208ENST00000488058 TSR1Q2NL82 804 aaKnown RBP24.1■■□□□ 1.45
RNF38-208ENST00000488058 MYLK3Q32MK0 819 aa24.1■■□□□ 1.45
RNF38-208ENST00000488058 PRAMEF14Q5SWL7 426 aa24.1■■□□□ 1.45
RNF38-208ENST00000488058 PSTKQ8IV42 348 aaKnown RBP24.1■■□□□ 1.45
RNF38-208ENST00000488058 VSTM4Q8IW00 320 aa24.1■■□□□ 1.45
RNF38-208ENST00000488058 PLPP6Q8IY26 295 aa24.1■■□□□ 1.45
RNF38-208ENST00000488058 OR8K1Q8NGG5 319 aa24.1■■□□□ 1.45
RNF38-208ENST00000488058 CASKIN2Q8WXE0 1202 aa24.1■■□□□ 1.45
RNF38-208ENST00000488058 SLC39A8Q9C0K1 460 aa24.1■■□□□ 1.45
RNF38-208ENST00000488058 LRRC19Q9H756 370 aa24.1■■□□□ 1.45
RNF38-208ENST00000488058 DMTF1Q9Y222 760 aa24.1■■□□□ 1.45
RNF38-208ENST00000488058 NCOR2Q9Y618 2525 aa24.09■■□□□ 1.45
RNF38-208ENST00000488058 A0A1W2PR77 199 aa24.09■■□□□ 1.45
RNF38-208ENST00000488058 ARHGAP42A6NI28 874 aa24.09■■□□□ 1.45
RNF38-208ENST00000488058 H3BRJ5 948 aa24.09■■□□□ 1.45
RNF38-208ENST00000488058 SLC31A1O15431 190 aa24.09■■□□□ 1.45
RNF38-208ENST00000488058 POP4O95707 220 aaKnown RBP24.09■■□□□ 1.45
RNF38-208ENST00000488058 PMLP29590 882 aa24.09■■□□□ 1.45
RNF38-208ENST00000488058 NUDT1P36639 197 aa24.09■■□□□ 1.45
RNF38-208ENST00000488058 PAPOLAP51003 745 aaKnown RBP24.09■■□□□ 1.45
RNF38-208ENST00000488058 STAT4Q14765 748 aa24.09■■□□□ 1.45
RNF38-208ENST00000488058 INO80DQ53TQ3 878 aaPredicted RBP24.09■■□□□ 1.45
RNF38-208ENST00000488058 HORMAD1Q86X24 394 aa24.09■■□□□ 1.45
RNF38-208ENST00000488058 EXOC2Q96KP1 924 aa24.09■■□□□ 1.45
RNF38-208ENST00000488058 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.09■■□□□ 1.45
RNF38-208ENST00000488058 CWC15Q9P013 229 aaKnown RBP24.09■■□□□ 1.45
RNF38-208ENST00000488058 CA5BQ9Y2D0 317 aa24.09■■□□□ 1.45
RNF38-208ENST00000488058 J3KR12 359 aa24.08■■□□□ 1.45
RNF38-208ENST00000488058 DFFAO00273 331 aa24.08■■□□□ 1.45
RNF38-208ENST00000488058 ARL4AP40617 200 aa24.08■■□□□ 1.45
RNF38-208ENST00000488058 RAD51Q06609 339 aa24.08■■□□□ 1.45
RNF38-208ENST00000488058 SUZ12Q15022 739 aaKnown RBP24.08■■□□□ 1.45
RNF38-208ENST00000488058 ZNF423Q2M1K9 1284 aa24.08■■□□□ 1.45
RNF38-208ENST00000488058 BOLA3Q53S33 107 aa24.08■■□□□ 1.45
RNF38-208ENST00000488058 NEK5Q6P3R8 708 aa24.08■■□□□ 1.45
RNF38-208ENST00000488058 ZNF564Q8TBZ8 553 aaPredicted RBP24.08■■□□□ 1.45
RNF38-208ENST00000488058 LRIG1Q96JA1 1093 aa24.08■■□□□ 1.45
RNF38-208ENST00000488058 KLHL32Q96NJ5 620 aa24.08■■□□□ 1.45
RNF38-208ENST00000488058 DNAJC7Q99615 494 aa24.08■■□□□ 1.45
RNF38-208ENST00000488058 GDF3Q9NR23 364 aa24.08■■□□□ 1.45
RNF38-208ENST00000488058 CTTNBP2NLQ9P2B4 639 aa24.08■■□□□ 1.45
RNF38-208ENST00000488058 ANGPTL2Q9UKU9 493 aa24.08■■□□□ 1.45
RNF38-208ENST00000488058 C16orf96A6NNT2 1141 aa24.07■■□□□ 1.44
RNF38-208ENST00000488058 PRAMEF26H0Y7S4 382 aa24.07■■□□□ 1.44
RNF38-208ENST00000488058 MYO1FO00160 1098 aa24.07■■□□□ 1.44
RNF38-208ENST00000488058 RARAP10276 462 aa24.07■■□□□ 1.44
RNF38-208ENST00000488058 ZNF135P52742 658 aaPredicted RBP24.07■■□□□ 1.44
RNF38-208ENST00000488058 ADKP55263 362 aaKnown RBP24.07■■□□□ 1.44
RNF38-208ENST00000488058 MAPK8IP2Q13387 824 aaPredicted RBP24.07■■□□□ 1.44
RNF38-208ENST00000488058 HNRNPDQ14103 355 aaKnown RBP24.07■■□□□ 1.44
RNF38-208ENST00000488058 CYTH1Q15438 398 aa24.07■■□□□ 1.44
RNF38-208ENST00000488058 TRIP6Q15654 476 aaKnown RBP24.07■■□□□ 1.44
RNF38-208ENST00000488058 SLC18A3Q16572 532 aa24.07■■□□□ 1.44
RNF38-208ENST00000488058 ZNF805Q5CZA5 627 aa24.07■■□□□ 1.44
RNF38-208ENST00000488058 SEL1L3Q68CR1 1132 aa24.07■■□□□ 1.44
RNF38-208ENST00000488058 TXNRD3NBQ6F5E7 133 aa24.07■■□□□ 1.44
RNF38-208ENST00000488058 GDPD4Q6W3E5 623 aa24.07■■□□□ 1.44
RNF38-208ENST00000488058 NPWQ8N729 165 aa24.07■■□□□ 1.44
RNF38-208ENST00000488058 CTNNBL1Q8WYA6 563 aaPredicted RBP24.07■■□□□ 1.44
RNF38-208ENST00000488058 OSBPL1AQ9BXW6 950 aa24.07■■□□□ 1.44
RNF38-208ENST00000488058 SP110Q9HB58 689 aa24.07■■□□□ 1.44
RNF38-208ENST00000488058 FZD3Q9NPG1 666 aa24.07■■□□□ 1.44
RNF38-208ENST00000488058 ABHD10Q9NUJ1 306 aa24.07■■□□□ 1.44
RNF38-208ENST00000488058 LHX3Q9UBR4 397 aa24.07■■□□□ 1.44
RNF38-208ENST00000488058 NENFQ9UMX5 172 aa24.07■■□□□ 1.44
RNF38-208ENST00000488058 ZFR2Q9UPR6 939 aaKnown RBP24.07■■□□□ 1.44
RNF38-208ENST00000488058 PCDHGB2Q9Y5G2 931 aa24.07■■□□□ 1.44
RNF38-208ENST00000488058 TLR4O00206 839 aa24.06■■□□□ 1.44
RNF38-208ENST00000488058 NEMP1O14524 444 aa24.06■■□□□ 1.44
RNF38-208ENST00000488058 FLRT2O43155 660 aa24.06■■□□□ 1.44
RNF38-208ENST00000488058 AKR1B10O60218 316 aa24.06■■□□□ 1.44
RNF38-208ENST00000488058 PRAMEF11O60813 436 aa24.06■■□□□ 1.44
RNF38-208ENST00000488058 GJC1P36383 396 aa24.06■■□□□ 1.44
RNF38-208ENST00000488058 ABL2P42684 1182 aa24.06■■□□□ 1.44
RNF38-208ENST00000488058 DPYSL2Q16555 572 aa24.06■■□□□ 1.44
RNF38-208ENST00000488058 ZNF284Q2VY69 593 aa24.06■■□□□ 1.44
RNF38-208ENST00000488058 NIPA2Q8N8Q9 360 aa24.06■■□□□ 1.44
RNF38-208ENST00000488058 MFSD2AQ8NA29 543 aa24.06■■□□□ 1.44
RNF38-208ENST00000488058 RHBDD1Q8TEB9 315 aa24.06■■□□□ 1.44
RNF38-208ENST00000488058 ELF4Q99607 663 aaPredicted RBP24.06■■□□□ 1.44
RNF38-208ENST00000488058 PACSIN1Q9BY11 444 aa24.06■■□□□ 1.44
RNF38-208ENST00000488058 PDFQ9HBH1 243 aa24.06■■□□□ 1.44
RNF38-208ENST00000488058 PCOLCE2Q9UKZ9 415 aa24.06■■□□□ 1.44
RNF38-208ENST00000488058 FADS3Q9Y5Q0 445 aa24.06■■□□□ 1.44
RNF38-208ENST00000488058 PCNX2A6NKB5 2137 aa24.05■■□□□ 1.44
RNF38-208ENST00000488058 A0A1B0GTQ1 180 aa24.05■■□□□ 1.44
RNF38-208ENST00000488058 INSIG1O15503 277 aa24.05■■□□□ 1.44
RNF38-208ENST00000488058 DFNA5O60443 496 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms