RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 DNAAF1Q8NEP3 725 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 HDAC7Q8WUI4 952 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 HSPH1Q92598 858 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 CUL5Q93034 780 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 THOC3Q96J01 351 aaKnown RBP3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 CLMNQ96JQ2 1002 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 GLIS2Q9BZE0 524 aaPredicted RBP3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 HIPK2Q9H2X6 1198 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 MAP6D1Q9H9H5 199 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 PCDHB16Q9NRJ7 776 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 BEX4Q9NWD9 120 aaPredicted RBP3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 GRHL1Q9NZI5 618 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 PEMTQ9UBM1 199 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 CTNNAL1Q9UBT7 734 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 CDH22Q9UJ99 828 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 ANAPC4Q9UJX5 808 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 PROCRQ9UNN8 238 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 DHDHQ9UQ10 334 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 ADGRF5Q8IZF2 1346 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 LY6G6EA0A0G2JKS1 128 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 CCDC196A0A1B0GTZ2 297 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 C17orf113A0A1B0GUU1 675 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 CBY3A6NI87 242 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 SLC25A17O43808 307 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 TACC1O75410 805 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 TMCC1O94876 653 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 RTN3O95197 1032 aaPredicted RBP3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 SERPINC1P01008 464 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 UNGP13051 313 aaPredicted RBP3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 PRF1P14222 555 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 TNFRSF1BP20333 461 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 ICAM3P32942 547 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 TNFSF8P32971 234 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 KRT9P35527 623 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 SLC16A2P36021 539 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 SKIV2L2P42285 1042 aaKnown RBP3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 DPP6P42658 865 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 HARS2P49590 506 aaKnown RBP3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 ARSFP54793 590 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 GEMIN4P57678 1058 aaKnown RBP3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 NANOS2P60321 138 aaKnown RBP3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 UFM1P61960 85 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 GAD2Q05329 585 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 SLC18A2Q05940 514 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 PTP4A2Q12974 167 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 CAMK1Q14012 370 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 RBMS2Q15434 407 aaKnown RBP3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 SLC9B1Q4ZJI4 515 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 ALG10Q5BKT4 473 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 ZNF628Q5EBL2 1059 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 ALG10BQ5I7T1 473 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 TTC39AQ5SRH9 613 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 C6orf10Q5SRN2 563 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 TMEM71Q6P5X7 295 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 C18orf65Q6ZTR6 163 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 CNTROBQ8N137 903 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 CPXM2Q8N436 756 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 SLC25A41Q8N5S1 370 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 KDM1BQ8NB78 822 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 ZNF548Q8NEK5 533 aaPredicted RBP3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 OR4N2Q8NGD1 307 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 RFFLQ8WZ73 363 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 ATOH1Q92858 354 aaPredicted RBP3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 SH3KBP1Q96B97 665 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 TEFMQ96QE5 360 aaKnown RBP3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 CTAGE1Q96RT6 745 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 WDR83Q9BRX9 315 aaKnown RBP3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 TUBB6Q9BUF5 446 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 JMJD4Q9H9V9 463 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 WDR6Q9NNW5 1121 aaKnown RBP3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 PNRC2Q9NPJ4 139 aaKnown RBP3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 SNTG1Q9NSN8 517 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 ZMYM2Q9UBW7 1377 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 SARDHQ9UL12 918 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 PCDHA12Q9UN75 941 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 CLDN16Q9Y5I7 305 aa3.06□□□□□ -1.92
R3HDM1-219ENST00000488035 KDM3AQ9Y4C1 1321 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 GOLGA6L10A0A0M3HER8 536 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 TMEM272A0A1B0GTI8 110 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 A0A1W2PQM1 296 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 TMEM247A6NEH6 219 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 GAGE10A6NGK3 116 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 FAM157AC9JC47 383 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 SNAP23O00161 211 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 GUCY1B2O75343 617 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 CLDN7O95471 211 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 IL1AP01583 271 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 T-ENOLP0DO92 83 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 TGFB3P10600 412 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 PAFAH1B1P43034 410 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 GPD2P43304 727 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 CCR9P51686 369 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 CLCNKBP51801 687 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 INPP5JQ15735 1006 aaPredicted RBP3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 TMEM268Q5VZI3 342 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 ATG9BQ674R7 924 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 TMEM81Q6P7N7 255 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 TMED8Q6PL24 325 aaPredicted RBP3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 RSRC2Q7L4I2 434 aaKnown RBP3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 PRSS45Q7RTY3 260 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms