RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 GDAP1L1Q96MZ0 367 aa20.77■□□□□ 0.92
HDAC4-209ENST00000487617 NUP85Q9BW27 656 aa20.77■□□□□ 0.92
HDAC4-209ENST00000487617 LRRC19Q9H756 370 aa20.77■□□□□ 0.92
HDAC4-209ENST00000487617 TLR4O00206 839 aa20.76■□□□□ 0.91
HDAC4-209ENST00000487617 SLC31A1O15431 190 aa20.76■□□□□ 0.91
HDAC4-209ENST00000487617 DFNA5O60443 496 aa20.76■□□□□ 0.91
HDAC4-209ENST00000487617 ADRB3P13945 408 aa20.76■□□□□ 0.91
HDAC4-209ENST00000487617 ERCC2P18074 760 aa20.76■□□□□ 0.91
HDAC4-209ENST00000487617 IL1R2P27930 398 aa20.76■□□□□ 0.91
HDAC4-209ENST00000487617 ZNF135P52742 658 aaPredicted RBP20.76■□□□□ 0.91
HDAC4-209ENST00000487617 RHOAP61586 193 aa20.76■□□□□ 0.91
HDAC4-209ENST00000487617 IL9RQ01113 521 aa20.76■□□□□ 0.91
HDAC4-209ENST00000487617 STAT4Q14765 748 aa20.76■□□□□ 0.91
HDAC4-209ENST00000487617 TRIP6Q15654 476 aaKnown RBP20.76■□□□□ 0.91
HDAC4-209ENST00000487617 PARS2Q7L3T8 475 aaKnown RBP20.76■□□□□ 0.91
HDAC4-209ENST00000487617 HORMAD1Q86X24 394 aa20.76■□□□□ 0.91
HDAC4-209ENST00000487617 OR8K1Q8NGG5 319 aa20.76■□□□□ 0.91
HDAC4-209ENST00000487617 ARHGEF26Q96DR7 871 aa20.76■□□□□ 0.91
HDAC4-209ENST00000487617 BTBD6Q96KE9 485 aa20.76■□□□□ 0.91
HDAC4-209ENST00000487617 SLC39A8Q9C0K1 460 aa20.76■□□□□ 0.91
HDAC4-209ENST00000487617 ZWILCHQ9H900 591 aa20.76■□□□□ 0.91
HDAC4-209ENST00000487617 GDF3Q9NR23 364 aa20.76■□□□□ 0.91
HDAC4-209ENST00000487617 UBA2Q9UBT2 640 aaPredicted RBP20.76■□□□□ 0.91
HDAC4-209ENST00000487617 IP6K2Q9UHH9 426 aa20.76■□□□□ 0.91
HDAC4-209ENST00000487617 ANAPC7Q9UJX3 599 aa20.76■□□□□ 0.91
HDAC4-209ENST00000487617 PCOLCE2Q9UKZ9 415 aa20.76■□□□□ 0.91
HDAC4-209ENST00000487617 ARHGAP42A6NI28 874 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 PRAMEF26H0Y7S4 382 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 FLRT2O43155 660 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 IGSF6O95976 241 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 PRLRP16471 622 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 HCAR3P49019 387 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 PAPOLAP51003 745 aaKnown RBP20.75■□□□□ 0.91
HDAC4-209ENST00000487617 NXPH1P58417 271 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 SHC2P98077 582 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 RAD51Q06609 339 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 SMTNL2Q2TAL5 461 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 ZNF284Q2VY69 593 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 BOLA3Q53S33 107 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 ZNF805Q5CZA5 627 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 PRAMEF14Q5SWL7 426 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 VSTM4Q8IW00 320 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 MFSD2AQ8NA29 543 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 RHBDD1Q8TEB9 315 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 HSPH1Q92598 858 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 ELF4Q99607 663 aaPredicted RBP20.75■□□□□ 0.91
HDAC4-209ENST00000487617 MYOCQ99972 504 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 OSBPL1AQ9BXW6 950 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 CWC15Q9P013 229 aaKnown RBP20.75■□□□□ 0.91
HDAC4-209ENST00000487617 CA5BQ9Y2D0 317 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 FADS3Q9Y5Q0 445 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 PLXNA2O75051 1894 aa20.75■□□□□ 0.91
HDAC4-209ENST00000487617 CHD5Q8TDI0 1954 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 A0A1B0GTQ1 180 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 C16orf96A6NNT2 1141 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 H3BRJ5 948 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 J3KR12 359 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 CBFA2T3O75081 653 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 UGT2B4P06133 528 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 TPM1P09493 284 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 TCF4P15884 667 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 CYTH1Q15438 398 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 TSR1Q2NL82 804 aaKnown RBP20.74■□□□□ 0.91
HDAC4-209ENST00000487617 SEL1L3Q68CR1 1132 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 DBX2Q6ZNG2 339 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 IQCHQ86VS3 1027 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 NIPA2Q8N8Q9 360 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 KNL1Q8NG31 2342 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 KLHL32Q96NJ5 620 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 CNTNAP3BQ96NU0 1288 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 DNAJC7Q99615 494 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 CNTNAP3Q9BZ76 1288 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 DEF6Q9H4E7 631 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 ZNHIT6Q9NWK9 470 aaKnown RBP20.74■□□□□ 0.91
HDAC4-209ENST00000487617 NENFQ9UMX5 172 aa20.74■□□□□ 0.91
HDAC4-209ENST00000487617 ZFR2Q9UPR6 939 aaKnown RBP20.74■□□□□ 0.91
HDAC4-209ENST00000487617 MYO1FO00160 1098 aa20.73■□□□□ 0.91
HDAC4-209ENST00000487617 DFFAO00273 331 aa20.73■□□□□ 0.91
HDAC4-209ENST00000487617 AP1G1O43747 822 aa20.73■□□□□ 0.91
HDAC4-209ENST00000487617 PCDHGA12O60330 932 aa20.73■□□□□ 0.91
HDAC4-209ENST00000487617 MAGEC1O60732 1142 aa20.73■□□□□ 0.91
HDAC4-209ENST00000487617 PRAMEF11O60813 436 aa20.73■□□□□ 0.91
HDAC4-209ENST00000487617 AKT2P31751 481 aa20.73■□□□□ 0.91
HDAC4-209ENST00000487617 ARL4AP40617 200 aa20.73■□□□□ 0.91
HDAC4-209ENST00000487617 OVGP1Q12889 678 aa20.73■□□□□ 0.91
HDAC4-209ENST00000487617 MAPK8IP2Q13387 824 aaPredicted RBP20.73■□□□□ 0.91
HDAC4-209ENST00000487617 DPYSQ14117 519 aa20.73■□□□□ 0.91
HDAC4-209ENST00000487617 DPYSL2Q16555 572 aa20.73■□□□□ 0.91
HDAC4-209ENST00000487617 AFMIDQ63HM1 303 aa20.73■□□□□ 0.91
HDAC4-209ENST00000487617 GDPD4Q6W3E5 623 aa20.73■□□□□ 0.91
HDAC4-209ENST00000487617 RAB7BQ96AH8 199 aa20.73■□□□□ 0.91
HDAC4-209ENST00000487617 FEM1CQ96JP0 617 aa20.73■□□□□ 0.91
HDAC4-209ENST00000487617 PDFQ9HBH1 243 aa20.73■□□□□ 0.91
HDAC4-209ENST00000487617 FZD3Q9NPG1 666 aa20.73■□□□□ 0.91
HDAC4-209ENST00000487617 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.73■□□□□ 0.91
HDAC4-209ENST00000487617 LHX3Q9UBR4 397 aa20.73■□□□□ 0.91
HDAC4-209ENST00000487617 BTBD3Q9Y2F9 522 aa20.73■□□□□ 0.91
HDAC4-209ENST00000487617 PCNX2A6NKB5 2137 aa20.72■□□□□ 0.91
HDAC4-209ENST00000487617 NEMP1O14524 444 aa20.72■□□□□ 0.91
HDAC4-209ENST00000487617 TOP3BO95985 862 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms