RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 RSPH1Q8WYR4 309 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 BTN2A3PQ96KV6 586 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 CDRT15Q96T59 188 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 NPY6RQ99463 290 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 ALG9Q9H6U8 611 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 MID1IP1Q9NPA3 183 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 PKD2L2Q9NZM6 624 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 A8MUI8 341 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 CXorf49A8MYA2 514 aaPredicted RBP11.95□□□□□ -0.5
TRA2B-214ENST00000487615 NR5A2O00482 541 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 KRT36O76013 467 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 FGFR1P11362 822 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 ME2P23368 584 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 PURAQ00577 322 aaKnown RBP11.95□□□□□ -0.5
TRA2B-214ENST00000487615 KRT72Q14CN4 511 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 MYO1HQ8N1T3 1032 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 ASB2Q96Q27 587 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 ADAMTS10Q9H324 1103 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 E7ESA3 106 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 ZNF197O14709 1029 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 KIF1CO43896 1103 aaKnown RBP11.94□□□□□ -0.5
TRA2B-214ENST00000487615 COX4I1P13073 169 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 TFEBP19484 476 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 TYMPP19971 482 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 MAP4P27816 1152 aaKnown RBP11.94□□□□□ -0.5
TRA2B-214ENST00000487615 HSPA13P48723 471 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 HK2P52789 917 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 PPIDQ08752 370 aaKnown RBP11.94□□□□□ -0.5
TRA2B-214ENST00000487615 TAF10Q12962 218 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 FSTL4Q6MZW2 842 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 FAM45BPQ6NSW5 357 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 TTC23LQ6PF05 361 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 RNF148Q8N7C7 305 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 FAM45AQ8TCE6 357 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 MAGEC3Q8TD91 643 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 PTCD2Q8WV60 388 aaKnown RBP11.94□□□□□ -0.5
TRA2B-214ENST00000487615 CCDC167Q9P0B6 97 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 SCN9AQ15858 1988 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 SOX11P35716 441 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 EP400NLQ6ZTU2 488 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 ITIH5Q86UX2 942 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 HDAC10Q969S8 669 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 CNDP1Q96KN2 507 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 CDH19Q9H159 772 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 PNPLA8Q9NP80 782 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 ARHGEF3Q9NR81 526 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 LMCD1Q9NZU5 365 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 GMIPQ9P107 970 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 TAF1LQ8IZX4 1826 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 FAM159BA6NKW6 160 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 MATN3O15232 486 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 COL6A2P12110 1019 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 RHOQP17081 205 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 LRPAP1P30533 357 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 GSCP56915 257 aaPredicted RBP11.94□□□□□ -0.5
TRA2B-214ENST00000487615 CDK18Q07002 472 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 SGO1Q5FBB7 561 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 EPB41L4BQ9H329 900 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 TMEM216Q9P0N5 145 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 FAM50BQ9Y247 325 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 TRAFD1O14545 582 aaPredicted RBP11.94□□□□□ -0.5
TRA2B-214ENST00000487615 SNUPNO95149 360 aaKnown RBP11.94□□□□□ -0.5
TRA2B-214ENST00000487615 MT-CYBP00156 380 aaPredicted RBP11.94□□□□□ -0.5
TRA2B-214ENST00000487615 HLA-DPA1P20036 260 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 EPHA3P29320 983 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 HOXA11P31270 313 aaPredicted RBP11.94□□□□□ -0.5
TRA2B-214ENST00000487615 ST8SIA6P61647 398 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 GRM3Q14832 879 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 GALNTL6Q49A17 601 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 RIPOR1Q6ZS17 1223 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 ULK2Q8IYT8 1036 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 SCAMP5Q8TAC9 235 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 ZNF184Q99676 751 aaPredicted RBP11.94□□□□□ -0.5
TRA2B-214ENST00000487615 USP29Q9HBJ7 922 aa11.94□□□□□ -0.5
TRA2B-214ENST00000487615 IRAK2O43187 625 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 TPST1O60507 370 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 TMCC1O94876 653 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 TRIM16O95361 564 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 FGF1P05230 155 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 ZCCHC18P0CG32 403 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 HCAR3P49019 387 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 PLD1Q13393 1074 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 IFNL1Q8IU54 200 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 IGDCC3Q8IVU1 814 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 SPATA6LQ8N4H0 392 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 SLC25A23Q9BV35 468 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 CACYBPQ9HB71 228 aaKnown RBP11.93□□□□□ -0.5
TRA2B-214ENST00000487615 CDK5RAP2Q96SN8 1893 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 RGSL1A5PLK6 1076 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 MRASO14807 208 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 TYROBPO43914 113 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 ZMPSTE24O75844 475 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 PRKCHP24723 683 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 FMO4P31512 558 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 SLC18A2Q05940 514 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 CRHR2Q13324 411 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 SYTL3Q4VX76 610 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 APLFQ8IW19 511 aaPredicted RBP11.93□□□□□ -0.5
TRA2B-214ENST00000487615 RIN3Q8TB24 985 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 PYDC1Q8WXC3 89 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms