RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 STAT1P42224 750 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 ABL2P42684 1182 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 MAPKAPK2P49137 400 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 E2F1Q01094 437 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 MYLK3Q32MK0 819 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 FKBP15Q5T1M5 1219 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 KIAA1161Q6NSJ0 714 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 WDR59Q6PJI9 974 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 TRIM72Q6ZMU5 477 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 CLEC17AQ6ZS10 378 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 TMC6Q7Z403 805 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 DCP2Q8IU60 420 aaKnown RBP12.41□□□□□ -0.42
VPS16-208ENST00000487461 RYBPQ8N488 228 aaPredicted RBP12.41□□□□□ -0.42
VPS16-208ENST00000487461 DCBLD1Q8N8Z6 715 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 OR6K2Q8NGY2 324 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 FAM174AQ8TBP5 190 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 NXPE2Q96DL1 559 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 IFT43Q96FT9 208 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 DCBLD2Q96PD2 775 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 KLF6Q99612 283 aaPredicted RBP12.41□□□□□ -0.42
VPS16-208ENST00000487461 TRPM6Q9BX84 2022 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 C1QTNF2Q9BXJ5 285 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 MAGEH1Q9H213 219 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 RETREG1Q9H6L5 497 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 GPR27Q9NS67 375 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 TDRD6O60522 2096 aaKnown RBP12.41□□□□□ -0.42
VPS16-208ENST00000487461 SCAMP1O15126 338 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 KDELR3O43731 214 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 MT-CO3P00414 261 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 CKMT1AP12532 417 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 ETFBP38117 255 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 EIF2S3P41091 472 aaKnown RBP12.4□□□□□ -0.42
VPS16-208ENST00000487461 COPB1P53618 953 aaKnown RBP12.4□□□□□ -0.42
VPS16-208ENST00000487461 DAB2P98082 770 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 SGCGQ13326 291 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 FZD2Q14332 565 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 POLD3Q15054 466 aaPredicted RBP12.4□□□□□ -0.42
VPS16-208ENST00000487461 SYCP1Q15431 976 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 CLEC16AQ2KHT3 1053 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 ZNF805Q5CZA5 627 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 KYAT3Q6YP21 454 aaKnown RBP12.4□□□□□ -0.42
VPS16-208ENST00000487461 KDM7AQ6ZMT4 941 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 PTAR1Q7Z6K3 402 aaPredicted RBP12.4□□□□□ -0.42
VPS16-208ENST00000487461 PHF13Q86YI8 300 aaPredicted RBP12.4□□□□□ -0.42
VPS16-208ENST00000487461 PYROXD2Q8N2H3 581 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 FAM172AQ8WUF8 416 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 TBC1D31Q96DN5 1066 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 BBC3Q96PG8 261 aaPredicted RBP12.4□□□□□ -0.42
VPS16-208ENST00000487461 LENG8Q96PV6 779 aaPredicted RBP12.4□□□□□ -0.42
VPS16-208ENST00000487461 NOL6Q9H6R4 1146 aaKnown RBP12.4□□□□□ -0.42
VPS16-208ENST00000487461 DNAJC28Q9NX36 388 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 ADAM22Q9P0K1 906 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 KLF15Q9UIH9 416 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 GGT7Q9UJ14 662 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 HPCAL4Q9UM19 191 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 CLCA2Q9UQC9 943 aa12.4□□□□□ -0.42
VPS16-208ENST00000487461 MYLKQ15746 1914 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 LY6G6EA0A0G2JKS1 128 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 SPTY2D1-AS1A0A0U1RR47 76 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 SIGLEC16A6NMB1 481 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 K7ESM1 405 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 KRIT1O00522 736 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 SPINT1O43278 529 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 TSPAN6O43657 245 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 BUB1O43683 1085 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 RAMP2O60895 175 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 NEBLO76041 1014 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 POP4O95707 220 aaKnown RBP12.39□□□□□ -0.43
VPS16-208ENST00000487461 GSRP00390 522 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 TPM2P07951 284 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 GPD1P21695 349 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 NSFP46459 744 aaKnown RBP12.39□□□□□ -0.43
VPS16-208ENST00000487461 GSCP56915 257 aaPredicted RBP12.39□□□□□ -0.43
VPS16-208ENST00000487461 HS1BP3Q53T59 392 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 TPRG1LQ5T0D9 272 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 ATXN7L2Q5T6C5 722 aaPredicted RBP12.39□□□□□ -0.43
VPS16-208ENST00000487461 RBM43Q6ZSC3 357 aaKnown RBP12.39□□□□□ -0.43
VPS16-208ENST00000487461 SLFN11Q7Z7L1 901 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 NETO2Q8NC67 525 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 OR2AP1Q8NGE2 309 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 ASB12Q8WXK4 309 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 NTAN1Q96AB6 310 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 RAB7BQ96AH8 199 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 APOLD1Q96LR9 279 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 KLHL32Q96NJ5 620 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 SELENOOQ9BVL4 669 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 KLC2Q9H0B6 622 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 NLGN3Q9NZ94 848 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 LIMA1Q9UHB6 759 aaKnown RBP12.39□□□□□ -0.43
VPS16-208ENST00000487461 ITM2BQ9Y287 266 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 DAAM1Q9Y4D1 1078 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 U3KQA8 63 aa12.39□□□□□ -0.43
VPS16-208ENST00000487461 TCRBV5S1A1TA0A578 114 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 NEMP2A6NFY4 417 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 LRRC10BA6NIK2 292 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 NEMP1O14524 444 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 FPGTO14772 594 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 OPA1O60313 960 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 BRINP1O60477 761 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 CSF2P04141 144 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms