RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 GGT7Q9UJ14 662 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 TLK1Q9UKI8 766 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 CFAP45Q9UL16 551 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 HEATR9A2RTY3 570 aa11.91□□□□□ -0.5
TRIM56-204ENST00000487252 TYW5A2RUC4 315 aaKnown RBP11.91□□□□□ -0.5
TRIM56-204ENST00000487252 TGFB1I1O43294 461 aa11.91□□□□□ -0.5
TRIM56-204ENST00000487252 KIF20AO95235 890 aa11.91□□□□□ -0.5
TRIM56-204ENST00000487252 ASS1P00966 412 aaKnown RBP11.91□□□□□ -0.5
TRIM56-204ENST00000487252 TRIM21P19474 475 aaKnown RBP11.91□□□□□ -0.5
TRIM56-204ENST00000487252 TCN2P20062 427 aa11.91□□□□□ -0.5
TRIM56-204ENST00000487252 MAP4P27816 1152 aaKnown RBP11.91□□□□□ -0.5
TRIM56-204ENST00000487252 CASP4P49662 377 aa11.91□□□□□ -0.5
TRIM56-204ENST00000487252 AP3M2P53677 418 aa11.91□□□□□ -0.5
TRIM56-204ENST00000487252 ELOCQ15369 112 aa11.91□□□□□ -0.5
TRIM56-204ENST00000487252 DLG2Q15700 870 aa11.91□□□□□ -0.5
TRIM56-204ENST00000487252 SGSM1Q2NKQ1 1148 aa11.91□□□□□ -0.5
TRIM56-204ENST00000487252 NADK2Q4G0N4 442 aa11.91□□□□□ -0.5
TRIM56-204ENST00000487252 OGFOD3Q6PK18 319 aa11.91□□□□□ -0.5
TRIM56-204ENST00000487252 ZSCAN30Q86W11 494 aa11.91□□□□□ -0.5
TRIM56-204ENST00000487252 Q8N9G6 341 aaPredicted RBP11.91□□□□□ -0.5
TRIM56-204ENST00000487252 DENND6BQ8NEG7 585 aa11.91□□□□□ -0.5
TRIM56-204ENST00000487252 RNF139Q8WU17 664 aa11.91□□□□□ -0.5
TRIM56-204ENST00000487252 KIAA1143Q96AT1 154 aaPredicted RBP11.91□□□□□ -0.5
TRIM56-204ENST00000487252 ALG14Q96F25 216 aa11.91□□□□□ -0.5
TRIM56-204ENST00000487252 DDX50Q9BQ39 737 aaKnown RBP11.91□□□□□ -0.5
TRIM56-204ENST00000487252 ASPSCR1Q9BZE9 553 aa11.91□□□□□ -0.5
TRIM56-204ENST00000487252 NUCKS1Q9H1E3 243 aaKnown RBP11.91□□□□□ -0.5
TRIM56-204ENST00000487252 ABCC13Q9NSE7 274 aa11.91□□□□□ -0.5
TRIM56-204ENST00000487252 TFIP11Q9UBB9 837 aaKnown RBP11.91□□□□□ -0.5
TRIM56-204ENST00000487252 STK17AQ9UEE5 414 aa11.91□□□□□ -0.5
TRIM56-204ENST00000487252 GPR34Q9UPC5 381 aa11.91□□□□□ -0.5
TRIM56-204ENST00000487252 DIDO1Q9BTC0 2240 aaKnown RBP11.9□□□□□ -0.5
TRIM56-204ENST00000487252 YJEFN3A6XGL0 299 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 ESPNB1AK53 854 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 E7ENQ6 273 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 KPNA3O00505 521 aaPredicted RBP11.9□□□□□ -0.5
TRIM56-204ENST00000487252 RFPL1O75677 317 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 CBX6O95503 412 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 CPNE6O95741 557 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 ALPIP09923 528 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 ZNF18P17022 549 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 CLCN1P35523 988 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 LONP1P36776 959 aaKnown RBP11.9□□□□□ -0.5
TRIM56-204ENST00000487252 COPB1P53618 953 aaKnown RBP11.9□□□□□ -0.5
TRIM56-204ENST00000487252 PMS2P54278 862 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 B4GALNT1Q00973 533 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 ABHD18Q0P651 414 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 BIRC3Q13489 604 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 CLPPQ16740 277 aaPredicted RBP11.9□□□□□ -0.5
TRIM56-204ENST00000487252 PRR30Q53SZ7 412 aaPredicted RBP11.9□□□□□ -0.5
TRIM56-204ENST00000487252 FAXCQ5TGI0 409 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 SP5Q6BEB4 398 aaPredicted RBP11.9□□□□□ -0.5
TRIM56-204ENST00000487252 MACC1Q6ZN28 852 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 TP53INP2Q8IXH6 220 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 NLGN4XQ8N0W4 816 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 XXYLT1Q8NBI6 393 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 NLGN4YQ8NFZ3 816 aaPredicted RBP11.9□□□□□ -0.5
TRIM56-204ENST00000487252 OR2A12Q8NGT7 310 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 KCTD13Q8WZ19 329 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 TAF4BQ92750 862 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 ART4Q93070 314 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 CENPTQ96BT3 561 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 FEM1CQ96JP0 617 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 ZNF396Q96N95 335 aaPredicted RBP11.9□□□□□ -0.5
TRIM56-204ENST00000487252 SLC29A3Q9BZD2 475 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 INTS2Q9H0H0 1204 aaKnown RBP11.9□□□□□ -0.5
TRIM56-204ENST00000487252 MLXIPLQ9NP71 852 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 AGPAT3Q9NRZ7 376 aa11.9□□□□□ -0.5
TRIM56-204ENST00000487252 IGHV5-10-1A0A0J9YXX1 117 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 M0QYT0 321 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 AP1G1O43747 822 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 RPN1P04843 607 aaKnown RBP11.89□□□□□ -0.51
TRIM56-204ENST00000487252 CHRNA3P32297 505 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 HK3P52790 923 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 YPEL5P62699 121 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 PPARDQ03181 441 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 ACCSLQ4AC99 568 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 ZRANB3Q5FWF4 1079 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 SPOPLQ6IQ16 392 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 PIM3Q86V86 326 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 UNC5BQ8IZJ1 945 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 SCML4Q8N228 414 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 SH2D3CQ8N5H7 860 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 RCBTB1Q8NDN9 531 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 PARD3BQ8TEW8 1205 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 TRIM44Q96DX7 344 aaPredicted RBP11.89□□□□□ -0.51
TRIM56-204ENST00000487252 FCRL2Q96LA5 508 aaPredicted RBP11.89□□□□□ -0.51
TRIM56-204ENST00000487252 EDEM3Q9BZQ6 932 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 CLSTN2Q9H4D0 955 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 RDH14Q9HBH5 336 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 RTN4Q9NQC3 1192 aaKnown RBP11.89□□□□□ -0.51
TRIM56-204ENST00000487252 DOLKQ9UPQ8 538 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 FADS3Q9Y5Q0 445 aa11.89□□□□□ -0.51
TRIM56-204ENST00000487252 LRRIQ3A6PVS8 624 aaPredicted RBP11.88□□□□□ -0.51
TRIM56-204ENST00000487252 B4E171 279 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 TULP2O00295 520 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 EIF3DO15371 548 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRIM56-204ENST00000487252 B4GAT1O43505 415 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 NUDT21O43809 227 aaKnown RBP11.88□□□□□ -0.51
TRIM56-204ENST00000487252 PRNPP04156 253 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms