RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 ZNF608Q9ULD9 1512 aaPredicted RBP5.63□□□□□ -1.51
COPS3-209ENST00000486810 POLR2AP24928 1970 aaKnown RBP5.62□□□□□ -1.51
COPS3-209ENST00000486810 GOLGA8JA6NMD2 632 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.62□□□□□ -1.51
COPS3-209ENST00000486810 F5H697 171 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 STX16-NPEPL1H3BU86 382 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 PSMD9O00233 223 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 AGR2O95994 175 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 HMGN1P05114 100 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 GRPP07492 148 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 ABCB1P08183 1280 aaPredicted RBP5.62□□□□□ -1.51
COPS3-209ENST00000486810 CDC25CP30307 473 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 SOX6P35712 828 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 KCNJ5P48544 419 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 TMED10P49755 219 aaKnown RBP5.62□□□□□ -1.51
COPS3-209ENST00000486810 HSD17B4P51659 736 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 ADARP55265 1226 aaKnown RBP5.62□□□□□ -1.51
COPS3-209ENST00000486810 UCP3P55916 312 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 EVCP57679 992 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 EIF4A1P60842 406 aaKnown RBP5.62□□□□□ -1.51
COPS3-209ENST00000486810 PRKCEQ02156 737 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 KDSRQ06136 332 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 SMARCB1Q12824 385 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 TUBB2AQ13885 445 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 FRG1Q14331 258 aaKnown RBP5.62□□□□□ -1.51
COPS3-209ENST00000486810 GBX1Q14549 363 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 LETM2Q2VYF4 491 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 P3H1Q32P28 736 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 PRR16Q569H4 304 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 HSP90AA5PQ58FG0 334 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 RBM20Q5T481 1227 aaKnown RBP5.62□□□□□ -1.51
COPS3-209ENST00000486810 TPGS2Q68CL5 300 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 OR52E8Q6IFG1 317 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 FAM180BQ6P0A1 224 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 DUS1LQ6P1R4 473 aaKnown RBP5.62□□□□□ -1.51
COPS3-209ENST00000486810 MZT2AQ6P582 158 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 APOA5Q6Q788 366 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 RFPL4BQ6ZWI9 263 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 USP50Q70EL3 339 aaPredicted RBP5.62□□□□□ -1.51
COPS3-209ENST00000486810 CHST15Q7LFX5 561 aaPredicted RBP5.62□□□□□ -1.51
COPS3-209ENST00000486810 CROCCP3Q8IVE0 287 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 ZNF540Q8NDQ6 660 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 SIMC1Q8NDZ2 872 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 DDHD1Q8NEL9 900 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 OR6C4Q8NGE1 309 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 OR10Z1Q8NGY1 313 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 CDC26Q8NHZ8 85 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 HCAR2Q8TDS4 363 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 SLC9A6Q92581 669 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 NCLNQ969V3 563 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 SLC47A1Q96FL8 570 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 REXO5Q96IC2 774 aaKnown RBP5.62□□□□□ -1.51
COPS3-209ENST00000486810 METTL2AQ96IZ6 378 aaKnown RBP5.62□□□□□ -1.51
COPS3-209ENST00000486810 HS6ST2Q96MM7 605 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 NUDCD1Q96RS6 583 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 COQ7Q99807 217 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 ZPBPQ9BS86 351 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 TUBB2BQ9BVA1 445 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 MXD3Q9BW11 206 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 CCDC106Q9BWC9 280 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 UNKQ9C0B0 810 aaKnown RBP5.62□□□□□ -1.51
COPS3-209ENST00000486810 TTYH3Q9C0H2 523 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 CCSER1Q9C0I3 900 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 CARD9Q9H257 536 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 FAM204AQ9H8W3 233 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 SMURF2Q9HAU4 748 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 WASH6PQ9NQA3 447 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 SERHLQ9NQF3 203 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 SAMSN1Q9NSI8 373 aaKnown RBP5.62□□□□□ -1.51
COPS3-209ENST00000486810 XPR1Q9UBH6 696 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 DBF4Q9UBU7 674 aaPredicted RBP5.62□□□□□ -1.51
COPS3-209ENST00000486810 MALT1Q9UDY8 824 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 AMACRQ9UHK6 382 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 CAB39Q9Y376 341 aaPredicted RBP5.62□□□□□ -1.51
COPS3-209ENST00000486810 HEY1Q9Y5J3 304 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 ADGRA2Q96PE1 1338 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 CDHR2Q9BYE9 1310 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 PLEKHG1Q9ULL1 1385 aa5.62□□□□□ -1.51
COPS3-209ENST00000486810 PVALEFA0A1B0GWK0 134 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 WDR91A4D1P6 747 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 CAPN8A6NHC0 703 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 TMEM114B3SHH9 223 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 ADM5C9JUS6 153 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 FAM227AF5H4B4 570 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 GOLGA8SH3BPF8 625 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 KIAA0355O15063 1070 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 MAPK13O15264 365 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 MPPED1O15442 326 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 PHGDHO43175 533 aaKnown RBP5.61□□□□□ -1.51
COPS3-209ENST00000486810 CRYZL1O95825 349 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 ZBED1O96006 694 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 CD4P01730 458 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 RHOP08100 348 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 ITGA2BP08514 1039 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 CYP3A4P08684 503 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 PDGFRAP16234 1089 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 ATF6P18850 670 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 KRT6CP48668 564 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 PTH2RP49190 550 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 SLC11A2P49281 568 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms