RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 HDAC8Q9BY41 377 aa12.65□□□□□ -0.38
HMG20B-211ENST00000486028 MIR1-1HGQ9H1L0 117 aa12.65□□□□□ -0.38
HMG20B-211ENST00000486028 PDFQ9HBH1 243 aa12.65□□□□□ -0.38
HMG20B-211ENST00000486028 ETNK2Q9NVF9 386 aa12.65□□□□□ -0.38
HMG20B-211ENST00000486028 KLHL11Q9NVR0 708 aa12.65□□□□□ -0.38
HMG20B-211ENST00000486028 TPX2Q9ULW0 747 aaKnown RBP12.65□□□□□ -0.38
HMG20B-211ENST00000486028 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.65□□□□□ -0.38
HMG20B-211ENST00000486028 MFHAS1Q9Y4C4 1052 aa12.65□□□□□ -0.38
HMG20B-211ENST00000486028 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.65□□□□□ -0.38
HMG20B-211ENST00000486028 NUMA1Q14980 2115 aa12.65□□□□□ -0.38
HMG20B-211ENST00000486028 TBC1D3DA0A087WVF3 549 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 TBC1D3IA0A087WXS9 549 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 TBC1D3EA0A087X179 549 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 TBC1D3KA0A087X1G2 549 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 LRRD1A4D1F6 860 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 TBC1D3FA6NER0 549 aaPredicted RBP12.64□□□□□ -0.39
HMG20B-211ENST00000486028 TBC1D3LB9A6J9 549 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 PLK4O00444 970 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 KRIT1O00522 736 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 PALMO75781 387 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 CFIP05156 583 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 SERPINF2P08697 491 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 TBC1D3HP0C7X1 549 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 KDELR1P24390 212 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 CCR5P51681 352 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 ADPRHP54922 357 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 IRX4P78413 519 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 TRIM61Q5EBN2 209 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 ATXN7L2Q5T6C5 722 aaPredicted RBP12.64□□□□□ -0.39
HMG20B-211ENST00000486028 TMCO4Q5TGY1 634 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 TBC1D3GQ6DHY5 549 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 TBC1D3CQ6IPX1 549 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 SLC23A3Q6PIS1 610 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 ERN2Q76MJ5 926 aaKnown RBP12.64□□□□□ -0.39
HMG20B-211ENST00000486028 KIAA1328Q86T90 577 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 TBC1D3Q8IZP1 549 aaPredicted RBP12.64□□□□□ -0.39
HMG20B-211ENST00000486028 NETO2Q8NC67 525 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 OR6K2Q8NGY2 324 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 PCDH19Q8TAB3 1148 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 RAPGEF5Q92565 580 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 FAM131CQ96AQ9 280 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 ARRDC3Q96B67 414 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 BIRC7Q96CA5 298 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 ZNF599Q96NL3 588 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 OSBPL1AQ9BXW6 950 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 MAK16Q9BXY0 300 aaKnown RBP12.64□□□□□ -0.39
HMG20B-211ENST00000486028 ZDHHC6Q9H6R6 413 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 DDX56Q9NY93 547 aaKnown RBP12.64□□□□□ -0.39
HMG20B-211ENST00000486028 EIF2B4Q9UI10 523 aaKnown RBP12.64□□□□□ -0.39
HMG20B-211ENST00000486028 SLC6A14Q9UN76 642 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 TFR2Q9UP52 801 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 REXO2Q9Y3B8 237 aaKnown RBP12.64□□□□□ -0.39
HMG20B-211ENST00000486028 HYOU1Q9Y4L1 999 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 ALG6Q9Y672 507 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 WASF2Q9Y6W5 498 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 CEP250Q9BV73 2442 aa12.64□□□□□ -0.39
HMG20B-211ENST00000486028 ATXN2Q99700 1313 aaKnown RBP12.63□□□□□ -0.39
HMG20B-211ENST00000486028 A0A1B0GTW7 788 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 BTNL10A8MVZ5 291 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 ZNF487B1APH4 448 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 PATE3B3GLJ2 98 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 BCAT2O15382 392 aaPredicted RBP12.63□□□□□ -0.39
HMG20B-211ENST00000486028 PLRG1O43660 514 aaKnown RBP12.63□□□□□ -0.39
HMG20B-211ENST00000486028 TNNT1P13805 278 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 ITGB7P26010 798 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 CD27P26842 260 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 VAV2P52735 878 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 NAP1L1P55209 391 aaKnown RBP12.63□□□□□ -0.39
HMG20B-211ENST00000486028 PAFAH1B3Q15102 231 aaKnown RBP12.63□□□□□ -0.39
HMG20B-211ENST00000486028 ZNF805Q5CZA5 627 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 PIP5KL1Q5T9C9 394 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 AGBL4Q5VU57 503 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 TCEAL6Q6IPX3 200 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 C11orf63Q6NUN7 778 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 FBXL19Q6PCT2 694 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 GDPD4Q6W3E5 623 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 ARHGAP36Q6ZRI8 547 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 VSIG1Q86XK7 387 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 TMEM139Q8IV31 216 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 TP53INP2Q8IXH6 220 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 ATPAF2Q8N5M1 289 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 NSMCE1Q8WV22 266 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 TCEAL3Q969E4 200 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 FAF2Q96CS3 445 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 PDLIM2Q96JY6 352 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 CINPQ9BW66 212 aaPredicted RBP12.63□□□□□ -0.39
HMG20B-211ENST00000486028 PREBQ9HCU5 417 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 LHX3Q9UBR4 397 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 SEPT3Q9UH03 358 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 CDV3Q9UKY7 258 aaKnown RBP12.63□□□□□ -0.39
HMG20B-211ENST00000486028 SPTBN4Q9H254 2564 aa12.63□□□□□ -0.39
HMG20B-211ENST00000486028 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.62□□□□□ -0.39
HMG20B-211ENST00000486028 RCCD1A6NED2 376 aa12.62□□□□□ -0.39
HMG20B-211ENST00000486028 PSTPIP1O43586 416 aa12.62□□□□□ -0.39
HMG20B-211ENST00000486028 MAFKO60675 156 aa12.62□□□□□ -0.39
HMG20B-211ENST00000486028 KRT1P04264 644 aa12.62□□□□□ -0.39
HMG20B-211ENST00000486028 UGT2B4P06133 528 aa12.62□□□□□ -0.39
HMG20B-211ENST00000486028 IGHV4-34P06331 123 aa12.62□□□□□ -0.39
HMG20B-211ENST00000486028 SYPP08247 313 aa12.62□□□□□ -0.39
HMG20B-211ENST00000486028 MX2P20592 715 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms