RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 LRRK1Q38SD2 2015 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 POLQO75417 2590 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 MED13Q9UHV7 2174 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 SCN8AQ9UQD0 1980 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 A0A1W2PNU3 283 aaPredicted RBP6.88□□□□□ -1.31
SMC4-217ENST00000485867 FAM92AA1XBS5 289 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 BLACEA4D250 179 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 C10orf142B7Z368 130 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 TRIM38O00635 465 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 WNT9AO14904 365 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 FGF10O15520 208 aaPredicted RBP6.88□□□□□ -1.31
SMC4-217ENST00000485867 OPA1O60313 960 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 BUB1BO60566 1050 aaPredicted RBP6.88□□□□□ -1.31
SMC4-217ENST00000485867 JAK2O60674 1132 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 CSO75390 466 aaKnown RBP6.88□□□□□ -1.31
SMC4-217ENST00000485867 REC8O95072 547 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 PLA2G4BP0C869 781 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 CD38P28907 300 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 SLC5A3P53794 718 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 NXPH1P58417 271 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 RPS14P62263 151 aaKnown RBP6.88□□□□□ -1.31
SMC4-217ENST00000485867 ASIC1P78348 528 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 FANCCQ00597 558 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 ZBTB16Q05516 673 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 NR1I3Q14994 352 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 E2F5Q15329 346 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 ZRSR1Q15695 479 aaKnown RBP6.88□□□□□ -1.31
SMC4-217ENST00000485867 IL17AQ16552 155 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 ZSCAN23Q3MJ62 389 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 TTC31Q49AM3 519 aaPredicted RBP6.88□□□□□ -1.31
SMC4-217ENST00000485867 HLA-DQA1Q5Y7H0 255 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 TMEM215Q68D42 235 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 MYCT1Q8N699 235 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 ZNF366Q8N895 744 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 NECAB1Q8N987 351 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 ZSWIM2Q8NEG5 633 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 POMGNT1Q8WZA1 660 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 EXTL1Q92935 676 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 PWWP2AQ96N64 755 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 FERD3LQ96RJ6 166 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 PLIN2Q99541 437 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 BACH2Q9BYV9 841 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 CIPCQ9C0C6 399 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 MTMR12Q9C0I1 747 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 PARVGQ9HBI0 331 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 AASDHPPTQ9NRN7 309 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 FHOD1Q9Y613 1164 aa6.88□□□□□ -1.31
SMC4-217ENST00000485867 A0A1B0GVM2 712 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 FAM47DPA6NHR8 397 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 CDRT15L2A8MXV6 281 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 TBX18O95935 607 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 DNTTP04053 509 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 TMEM191BP0C7N4 346 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 PTPN1P18031 435 aaKnown RBP6.87□□□□□ -1.31
SMC4-217ENST00000485867 CD247P20963 164 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 RBMS1P29558 406 aaKnown RBP6.87□□□□□ -1.31
SMC4-217ENST00000485867 ABCD1P33897 745 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 TRAPPC10P48553 1259 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 GALCP54803 685 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 GOLGA8FQ08AF8 430 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 GOLGA8DPQ0D2H9 430 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 KCNJ12Q14500 433 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 TMEM119Q4V9L6 283 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 ZNF394Q53GI3 561 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 C3orf38Q5JPI3 329 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 NCEH1Q6PIU2 408 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 CYP2R1Q6VVX0 501 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 UNC5AQ6ZN44 842 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 GPBP1Q86WP2 473 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 SPATS2Q86XZ4 545 aaKnown RBP6.87□□□□□ -1.31
SMC4-217ENST00000485867 LINC01356Q8N9X3 169 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 TP53I13Q8NBR0 393 aaPredicted RBP6.87□□□□□ -1.31
SMC4-217ENST00000485867 GTF3C6Q969F1 213 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 SAAL1Q96ER3 474 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 PRR11Q96HE9 360 aaPredicted RBP6.87□□□□□ -1.31
SMC4-217ENST00000485867 HPDLQ96IR7 371 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 SLC46A1Q96NT5 459 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 CCNL2Q96S94 520 aaPredicted RBP6.87□□□□□ -1.31
SMC4-217ENST00000485867 KCNK16Q96T55 309 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 SEMA3CQ99985 751 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 MRPL45Q9BRJ2 306 aaKnown RBP6.87□□□□□ -1.31
SMC4-217ENST00000485867 FAM213AQ9BRX8 229 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 B3GNT5Q9BYG0 378 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 TMEM245Q9H330 911 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 FOXP1Q9H334 677 aaPredicted RBP6.87□□□□□ -1.31
SMC4-217ENST00000485867 DPEP3Q9H4B8 488 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 ERVMER34-1Q9H9K5 563 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 LUC7LQ9NQ29 371 aaKnown RBP6.87□□□□□ -1.31
SMC4-217ENST00000485867 METTL5Q9NRN9 209 aaKnown RBP6.87□□□□□ -1.31
SMC4-217ENST00000485867 RBAKQ9NYW8 714 aaPredicted RBP6.87□□□□□ -1.31
SMC4-217ENST00000485867 CLEC4EQ9ULY5 219 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 PPT2Q9UMR5 302 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 SATB2Q9UPW6 733 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 PCDHGB7Q9Y5F8 929 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 CENPEQ02224 2701 aa6.87□□□□□ -1.31
SMC4-217ENST00000485867 FBN2P35556 2912 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 F8P00451 2351 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 TLR4O00206 839 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 MDM4O15151 490 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 SDC3O75056 442 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms