RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 GJB3O75712 270 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 NTSR1P30989 418 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 TIE1P35590 1138 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 NNMTP40261 264 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 DRG2P55039 364 aaKnown RBP16.05■□□□□ 0.16
APOE-205ENST00000485628 MAXP61244 160 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 RHOAP61586 193 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 ST8SIA6P61647 398 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 SKOR1P84550 965 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 KCTD19Q17RG1 926 aaPredicted RBP16.05■□□□□ 0.16
APOE-205ENST00000485628 MYLK3Q32MK0 819 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 C2orf27AQ580R0 203 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 DUPD1Q68J44 220 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 PKN3Q6P5Z2 889 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 DPY19L3Q6ZPD9 716 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 TRIM67Q6ZTA4 783 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 MAATS1Q7Z4T9 603 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 SRLQ86TD4 932 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 BBS5Q8N3I7 341 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 PJA1Q8NG27 643 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 OXNAD1Q96HP4 312 aaPredicted RBP16.05■□□□□ 0.16
APOE-205ENST00000485628 LRRC1Q9BTT6 524 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 CINPQ9BW66 212 aaPredicted RBP16.05■□□□□ 0.16
APOE-205ENST00000485628 FOXQ1Q9C009 403 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 POLR1EQ9GZS1 481 aaKnown RBP16.05■□□□□ 0.16
APOE-205ENST00000485628 MTG2Q9H4K7 406 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 LMAN1LQ9HAT1 526 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 NOD2Q9HC29 1040 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 PRSS16Q9NQE7 514 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 CACNA2D2Q9NY47 1150 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 SEPT10Q9P0V9 454 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 SUN2Q9UH99 717 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 NDRG2Q9UN36 371 aaKnown RBP16.05■□□□□ 0.16
APOE-205ENST00000485628 WASF2Q9Y6W5 498 aa16.05■□□□□ 0.16
APOE-205ENST00000485628 TRAFD1O14545 582 aaPredicted RBP16.04■□□□□ 0.16
APOE-205ENST00000485628 ALOX15BO15296 676 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 INSIG1O15503 277 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 HTRA2O43464 458 aaPredicted RBP16.04■□□□□ 0.16
APOE-205ENST00000485628 STK10O94804 968 aaKnown RBP16.04■□□□□ 0.16
APOE-205ENST00000485628 POP4O95707 220 aaKnown RBP16.04■□□□□ 0.16
APOE-205ENST00000485628 GAS8O95995 478 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 CTSLP07711 333 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 HLA-EP13747 358 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 NFKB1P19838 968 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 SEC13P55735 322 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 SNRPD1P62314 119 aaKnown RBP16.04■□□□□ 0.16
APOE-205ENST00000485628 DSC2Q02487 901 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 SEMA5AQ13591 1074 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 ZNF235Q14590 738 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 FNDC3BQ53EP0 1204 aaKnown RBP16.04■□□□□ 0.16
APOE-205ENST00000485628 ATXN7L2Q5T6C5 722 aaPredicted RBP16.04■□□□□ 0.16
APOE-205ENST00000485628 CWF19L1Q69YN2 538 aaKnown RBP16.04■□□□□ 0.16
APOE-205ENST00000485628 KDELC1Q6UW63 502 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 SERPINA13PQ6UXR4 307 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 Q6ZVU0 165 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 TRMT11Q7Z4G4 463 aaKnown RBP16.04■□□□□ 0.16
APOE-205ENST00000485628 CCDC114Q96M63 670 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 SEMA3CQ99985 751 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 ERP44Q9BS26 406 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 MLPHQ9BV36 600 aaPredicted RBP16.04■□□□□ 0.16
APOE-205ENST00000485628 TNKS2Q9H2K2 1166 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 ETNK1Q9HBU6 452 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 ZDHHC4Q9NPG8 344 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 KLHL8Q9P2G9 620 aaPredicted RBP16.04■□□□□ 0.16
APOE-205ENST00000485628 MMP17Q9ULZ9 603 aa16.04■□□□□ 0.16
APOE-205ENST00000485628 TTC24A2A3L6 582 aaPredicted RBP16.03■□□□□ 0.16
APOE-205ENST00000485628 RIOK3O14730 519 aaKnown RBP16.03■□□□□ 0.16
APOE-205ENST00000485628 FZD6O60353 706 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 SIN3BO75182 1162 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 SLU7O95391 586 aaKnown RBP16.03■□□□□ 0.16
APOE-205ENST00000485628 KLF8O95600 359 aaPredicted RBP16.03■□□□□ 0.16
APOE-205ENST00000485628 PRLP01236 227 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 IFNB1P01574 187 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 PSMB4P28070 264 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 ADRA1AP35348 466 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 FDFT1P37268 417 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 CCNHP51946 323 aaPredicted RBP16.03■□□□□ 0.16
APOE-205ENST00000485628 AP1S1P61966 158 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 CBLBQ13191 982 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 LRRC32Q14392 662 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 ITPRIPL1Q6GPH6 555 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 Q6ZS52 159 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 GSTA5Q7RTV2 222 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 CHPFQ8IZ52 775 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 ZNF366Q8N895 744 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 CCDC89Q8N998 374 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 TXNDC5Q8NBS9 432 aaKnown RBP16.03■□□□□ 0.16
APOE-205ENST00000485628 CHST14Q8NCH0 376 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 RPLP0P6Q8NHW5 317 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 CCHCR1Q8TD31 782 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 ECHDC3Q96DC8 303 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 LRIG1Q96JA1 1093 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 GDAP1L1Q96MZ0 367 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 TUBGCP5Q96RT8 1024 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 TRIB3Q96RU7 358 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 TM6SF2Q9BZW4 377 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 CHRDQ9H2X0 955 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 VPS45Q9NRW7 570 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 HECAQ9UBI9 543 aaPredicted RBP16.03■□□□□ 0.16
APOE-205ENST00000485628 DMGDHQ9UI17 866 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms