RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 PSTKQ8IV42 348 aaKnown RBP13.11□□□□□ -0.31
HDAC1-209ENST00000484305 OR8K1Q8NGG5 319 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 KLK6Q92876 244 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 NCAPGQ9BPX3 1015 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 SLC39A8Q9C0K1 460 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 LRRC19Q9H756 370 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 ZWILCHQ9H900 591 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 CWC15Q9P013 229 aaKnown RBP13.11□□□□□ -0.31
HDAC1-209ENST00000484305 ZFR2Q9UPR6 939 aaKnown RBP13.11□□□□□ -0.31
HDAC1-209ENST00000484305 CA5BQ9Y2D0 317 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 C16orf96A6NNT2 1141 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 J3KR12 359 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 TLR4O00206 839 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 SLC31A1O15431 190 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 CBFA2T3O75081 653 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 PCDH8O95206 1070 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 POP4O95707 220 aaKnown RBP13.1□□□□□ -0.31
HDAC1-209ENST00000484305 PRLRP16471 622 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 HCAR3P49019 387 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 PAPOLAP51003 745 aaKnown RBP13.1□□□□□ -0.31
HDAC1-209ENST00000484305 NDST2P52849 883 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 RHOAP61586 193 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 IL9RQ01113 521 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 DPYSQ14117 519 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 TRIM14Q14142 442 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 PIGHQ14442 188 aaPredicted RBP13.1□□□□□ -0.31
HDAC1-209ENST00000484305 CYTH1Q15438 398 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 SMTNL2Q2TAL5 461 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 ZNF284Q2VY69 593 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 SETMARQ53H47 684 aaPredicted RBP13.1□□□□□ -0.31
HDAC1-209ENST00000484305 AFMIDQ63HM1 303 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 SEL1L3Q68CR1 1132 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 TXNRD3NBQ6F5E7 133 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 NEK5Q6P3R8 708 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 FBXL19Q6PCT2 694 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 PARS2Q7L3T8 475 aaKnown RBP13.1□□□□□ -0.31
HDAC1-209ENST00000484305 HORMAD1Q86X24 394 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 ARHGAP12Q8IWW6 846 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 NPWQ8N729 165 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 SETD7Q8WTS6 366 aaKnown RBP13.1□□□□□ -0.31
HDAC1-209ENST00000484305 CASKIN2Q8WXE0 1202 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 SKA1Q96BD8 255 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 LRIG1Q96JA1 1093 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 GDAP1L1Q96MZ0 367 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 PDFQ9HBH1 243 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 DONSONQ9NYP3 566 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 LHX3Q9UBR4 397 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 IP6K2Q9UHH9 426 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 ANAPC7Q9UJX3 599 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 PCOLCE2Q9UKZ9 415 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 DMTF1Q9Y222 760 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 BTBD3Q9Y2F9 522 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 PCDHGB2Q9Y5G2 931 aa13.1□□□□□ -0.31
HDAC1-209ENST00000484305 ANKRD36A6QL64 1941 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 TPRP12270 2363 aaKnown RBP13.09□□□□□ -0.31
HDAC1-209ENST00000484305 PRAMEF26H0Y7S4 382 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 INSIG1O15503 277 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 PRAMEF11O60813 436 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 TOP3BO95985 862 aaKnown RBP13.09□□□□□ -0.31
HDAC1-209ENST00000484305 UGT2B4P06133 528 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 RARAP10276 462 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 NUDT1P36639 197 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 ADKP55263 362 aaKnown RBP13.09□□□□□ -0.31
HDAC1-209ENST00000484305 FOXC1Q12948 553 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 HNRNPDQ14103 355 aaKnown RBP13.09□□□□□ -0.31
HDAC1-209ENST00000484305 STAT4Q14765 748 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 TRIP6Q15654 476 aaKnown RBP13.09□□□□□ -0.31
HDAC1-209ENST00000484305 DPYSL2Q16555 572 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 SLC18A3Q16572 532 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 ASTE1Q2TB18 679 aaPredicted RBP13.09□□□□□ -0.31
HDAC1-209ENST00000484305 BOLA3Q53S33 107 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 SLC45A4Q5BKX6 768 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 ZNF805Q5CZA5 627 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 POLNQ7Z5Q5 900 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 SPATS2Q86XZ4 545 aaKnown RBP13.09□□□□□ -0.31
HDAC1-209ENST00000484305 TP53INP2Q8IXH6 220 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 NIPA2Q8N8Q9 360 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 MFSD2AQ8NA29 543 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 HSPH1Q92598 858 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 KLHL32Q96NJ5 620 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 CNTNAP3BQ96NU0 1288 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 MYOCQ99972 504 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 PACSIN1Q9BY11 444 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 CNTNAP3Q9BZ76 1288 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 FZD3Q9NPG1 666 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 UBA2Q9UBT2 640 aaPredicted RBP13.09□□□□□ -0.31
HDAC1-209ENST00000484305 ANGPTL2Q9UKU9 493 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 WASF3Q9UPY6 502 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 MFHAS1Q9Y4C4 1052 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 PCDHB9Q9Y5E1 797 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 FADS3Q9Y5Q0 445 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 SHROOM3Q8TF72 1996 aa13.09□□□□□ -0.31
HDAC1-209ENST00000484305 TDRD6O60522 2096 aaKnown RBP13.08□□□□□ -0.32
HDAC1-209ENST00000484305 A0A1B0GTQ1 180 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 ARHGAP42A6NI28 874 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 MYO1FO00160 1098 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 DFFAO00273 331 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 FLRT2O43155 660 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 AP1G1O43747 822 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 PCDHGA12O60330 932 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms