RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 ABL2P42684 1182 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 ACADSBP45954 432 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 FMO5P49326 533 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 NDUFA8P51970 172 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 PMS1P54277 932 aaKnown RBP11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 KRT83P78385 493 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 EIF3IQ13347 325 aaKnown RBP11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 PKP1Q13835 747 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 SKIDA1Q1XH10 827 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 C5orf22Q49AR2 442 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 CLEC18BQ6UXF7 455 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 NYAP1Q6ZVC0 841 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 TMEM110Q86TL2 294 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 ARHGEF19Q8IW93 802 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 SDR16C5Q8N3Y7 309 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 CLEC18CQ8NCF0 446 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 LMO3Q8TAP4 145 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 BTN2A2Q8WVV5 523 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 PPP1R16AQ96I34 528 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 LENG8Q96PV6 779 aaPredicted RBP11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 GFM1Q96RP9 751 aaKnown RBP11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 C2orf49Q9BVC5 232 aaPredicted RBP11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 TRIM62Q9BVG3 475 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 SIK2Q9H0K1 926 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 THAP9Q9H5L6 903 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 ANLNQ9NQW6 1124 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 GEMIN8Q9NWZ8 242 aaKnown RBP11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 FOXJ2Q9P0K8 574 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 SIRPGQ9P1W8 387 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 SEPT3Q9UH03 358 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 SNX10Q9Y5X0 201 aa11.08□□□□□ -0.64
SMARCC1-205ENST00000483847 I6L893 689 aaPredicted RBP11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 SLC16A3O15427 465 aaKnown RBP11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 AP1G1O43747 822 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 GRAP2O75791 330 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 RPLP0P05388 317 aaKnown RBP11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 JMJD7P0C870 316 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 L1CAMP32004 1257 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 IGFALSP35858 605 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 SYKP43405 635 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 THOP1P52888 689 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 CDH4P55283 916 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 CDK17Q00537 523 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 NME3Q13232 169 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 SGCGQ13326 291 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 FAXCQ5TGI0 409 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 ANKRD40Q6AI12 368 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 ESRP1Q6NXG1 681 aaKnown RBP11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 ZNF683Q8IZ20 524 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 DCAF4L2Q8NA75 395 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 OR7D4Q8NG98 312 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 PCDH19Q8TAB3 1148 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 STK32AQ8WU08 396 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 KREMEN1Q96MU8 473 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 SLC2A13Q96QE2 648 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 CPEB1Q9BZB8 566 aaKnown RBP11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 STRADBQ9C0K7 418 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 METTL14Q9HCE5 456 aaKnown RBP11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 ACP6Q9NPH0 428 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 ARMCX3Q9UH62 379 aaPredicted RBP11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 CFAP45Q9UL16 551 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 MAN2B2Q9Y2E5 1009 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 LOXL2Q9Y4K0 774 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 ACTL7AQ9Y615 435 aa11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 TEP1Q99973 2627 aaKnown RBP11.07□□□□□ -0.64
SMARCC1-205ENST00000483847 TRIM49BA6NDI0 452 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 ADCY5O95622 1261 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 GKP32189 559 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 CCKBRP32239 447 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 PRCPP42785 496 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 RECQLP46063 649 aaPredicted RBP11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 DNA2P51530 1060 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 CLCN6P51797 869 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 CCNHP51946 323 aaPredicted RBP11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 FOXK1P85037 733 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 PDCLQ13371 301 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 OTUD1Q5VV17 481 aaPredicted RBP11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 ATL3Q6DD88 541 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 HIST2H2BCQ6DN03 193 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 KRBA2Q6ZNG9 492 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 TFAP2DQ7Z6R9 452 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 VPS36Q86VN1 386 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 DTX1Q86Y01 620 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 ARL10Q8N8L6 244 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 DENND6BQ8NEG7 585 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 ZNF564Q8TBZ8 553 aaPredicted RBP11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 JPH3Q8WXH2 748 aaPredicted RBP11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 USP7Q93009 1102 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 VOPP1Q96AW1 172 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 CENPTQ96BT3 561 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 TBATAQ96M53 351 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 MED15Q96RN5 788 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 HEPHQ9BQS7 1158 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 SLC13A1Q9BZW2 595 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 MBNL1Q9NR56 388 aaKnown RBP11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 MPP6Q9NZW5 540 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 SEPT10Q9P0V9 454 aa11.06□□□□□ -0.64
SMARCC1-205ENST00000483847 FAM237AA0A1B0GTK4 181 aa11.05□□□□□ -0.64
SMARCC1-205ENST00000483847 C9orf172C9J069 976 aa11.05□□□□□ -0.64
SMARCC1-205ENST00000483847 TMX2-CTNND1H3BSU7 103 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms