RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 RPS24P62847 133 aaKnown RBP13.4□□□□□ -0.26
CPNE1-225ENST00000483495 ITKQ08881 620 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 SLC14A2Q15849 920 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 PCSK7Q16549 785 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 FYB2Q5VWT5 728 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 ESRP1Q6NXG1 681 aaKnown RBP13.4□□□□□ -0.26
CPNE1-225ENST00000483495 ITIH5Q86UX2 942 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 OR52K2Q8NGK3 314 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 WBP2Q969T9 261 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 GPR22Q99680 433 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 DDX50Q9BQ39 737 aaKnown RBP13.4□□□□□ -0.26
CPNE1-225ENST00000483495 ATXN3LQ9H3M9 355 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 RHOJQ9H4E5 214 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 IL21Q9HBE4 155 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 SSX2IPQ9Y2D8 614 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 TBC1D30Q9Y2I9 924 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 MTO1Q9Y2Z2 717 aaKnown RBP13.4□□□□□ -0.26
CPNE1-225ENST00000483495 ASB3Q9Y575 518 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 CHD5Q8TDI0 1954 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 A0A1B0GVM2 712 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 TCAF2A6NFQ2 919 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 MUSKO15146 869 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 KDELR3O43731 214 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 FGF18O76093 207 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 EPOP01588 193 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 PRKCGP05129 697 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 MPOP05164 745 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 ATXN1LP0C7T5 689 aaKnown RBP13.4□□□□□ -0.26
CPNE1-225ENST00000483495 TROVE2P10155 538 aaKnown RBP eCLIP13.4□□□□□ -0.26
CPNE1-225ENST00000483495 POLD2P49005 469 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 LIG3P49916 1009 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 SGSHP51688 502 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 UGP2Q16851 508 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 PABPC1LQ4VXU2 614 aaKnown RBP13.4□□□□□ -0.26
CPNE1-225ENST00000483495 N4BP2L1Q5TBK1 243 aaPredicted RBP13.4□□□□□ -0.26
CPNE1-225ENST00000483495 ATG16L1Q676U5 607 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 C16orf59Q7L2K0 433 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 OTOP2Q7RTS6 562 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 CLEC14AQ86T13 490 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 ZC3HC1Q86WB0 502 aaKnown RBP13.4□□□□□ -0.26
CPNE1-225ENST00000483495 NUDCD3Q8IVD9 361 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 FITM2Q8N6M3 262 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 E2F7Q96AV8 911 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 VPS39Q96JC1 886 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 C7orf26Q96N11 449 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 MGME1Q9BQP7 344 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 MECRQ9BV79 373 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 ACE2Q9BYF1 805 aaPredicted RBP13.4□□□□□ -0.26
CPNE1-225ENST00000483495 ZNF334Q9HCZ1 680 aaPredicted RBP13.4□□□□□ -0.26
CPNE1-225ENST00000483495 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.39□□□□□ -0.27
CPNE1-225ENST00000483495 GFRA2O00451 464 aa13.39□□□□□ -0.27
CPNE1-225ENST00000483495 GREM1O60565 184 aa13.39□□□□□ -0.27
CPNE1-225ENST00000483495 SNNO75324 88 aaPredicted RBP13.39□□□□□ -0.27
CPNE1-225ENST00000483495 VAPBO95292 243 aa13.39□□□□□ -0.27
CPNE1-225ENST00000483495 PROCP04070 461 aa13.39□□□□□ -0.27
CPNE1-225ENST00000483495 NEFHP12036 1026 aa13.39□□□□□ -0.27
CPNE1-225ENST00000483495 GABRB3P28472 473 aa13.39□□□□□ -0.27
CPNE1-225ENST00000483495 ETFBP38117 255 aa13.39□□□□□ -0.27
CPNE1-225ENST00000483495 ZNF177Q13360 481 aaPredicted RBP13.39□□□□□ -0.27
CPNE1-225ENST00000483495 ZNF235Q14590 738 aa13.39□□□□□ -0.27
CPNE1-225ENST00000483495 RFTN1Q14699 578 aaPredicted RBP13.39□□□□□ -0.27
CPNE1-225ENST00000483495 CNGA3Q16281 694 aa13.39□□□□□ -0.27
CPNE1-225ENST00000483495 PPM1JQ5JR12 505 aa13.39□□□□□ -0.27
CPNE1-225ENST00000483495 KDELC2Q7Z4H8 507 aa13.39□□□□□ -0.27
CPNE1-225ENST00000483495 HERC6Q8IVU3 1022 aa13.39□□□□□ -0.27
CPNE1-225ENST00000483495 SLC25A41Q8N5S1 370 aa13.39□□□□□ -0.27
CPNE1-225ENST00000483495 OR7D4Q8NG98 312 aa13.39□□□□□ -0.27
CPNE1-225ENST00000483495 PPM1EQ8WY54 764 aa13.39□□□□□ -0.27
CPNE1-225ENST00000483495 CLP1Q92989 425 aaKnown RBP13.39□□□□□ -0.27
CPNE1-225ENST00000483495 FEM1CQ96JP0 617 aa13.39□□□□□ -0.27
CPNE1-225ENST00000483495 SEMA3CQ99985 751 aa13.39□□□□□ -0.27
CPNE1-225ENST00000483495 SLC2A6Q9UGQ3 507 aa13.39□□□□□ -0.27
CPNE1-225ENST00000483495 SEPT3Q9UH03 358 aa13.39□□□□□ -0.27
CPNE1-225ENST00000483495 CCDC78A2IDD5 438 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 MROH6A6NGR9 719 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 GOLGA8TH3BQL2 631 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 UBOX5O94941 541 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 AHSGP02765 367 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 CNPP09543 421 aaKnown RBP13.38□□□□□ -0.27
CPNE1-225ENST00000483495 HSPA8P11142 646 aaKnown RBP13.38□□□□□ -0.27
CPNE1-225ENST00000483495 MBL2P11226 248 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-225ENST00000483495 ALDH3A1P30838 453 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 OXCT1P55809 520 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 OCRLQ01968 901 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 BST1Q10588 318 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 BNIP1Q12981 228 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 SIRPB2Q5JXA9 342 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 TSTD2Q5T7W7 516 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 CES4AQ5XG92 561 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 LILRA6Q6PI73 481 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 ZNF783Q6ZMS7 281 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 NLRP9Q7RTR0 991 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 CMC1Q7Z7K0 106 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 C10orf67Q8IYJ2 551 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 BBS5Q8N3I7 341 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 C2CD4AQ8NCU7 369 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-225ENST00000483495 ADAMTS19Q8TE59 1207 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 PSKH2Q96QS6 385 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 FAM167BQ9BTA0 163 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 TRIM55Q9BYV6 548 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms