RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 H0Y8X5 98 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 TULP2O00295 520 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 PPP1R12AO14974 1030 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-207ENST00000483407 VILLO15195 856 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 YKT6O15498 198 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 IRAK2O43187 625 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 PAPSS1O43252 624 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-207ENST00000483407 DNAJC6O75061 913 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 PROCP04070 461 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 ASLP04424 464 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 VDRP11473 427 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 CDK4P11802 303 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 TBXAS1P24557 533 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-207ENST00000483407 HNF1BP35680 557 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 KRT85P78386 507 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 CUL2Q13617 745 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 SMAD1Q15797 465 aaKnown RBP6.08□□□□□ -1.44
CSDE1-207ENST00000483407 ZCWPW2Q504Y3 356 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 DCAF17Q5H9S7 520 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-207ENST00000483407 TCERG1LQ5VWI1 586 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 FOXB2Q5VYV0 432 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 KIAA0895LQ68EN5 471 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 LAYNQ6UX15 382 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 USP30Q70CQ3 517 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 CDH24Q86UP0 819 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 ADIPOR2Q86V24 386 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 TMPRSS12Q86WS5 348 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 MFN1Q8IWA4 741 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 SCML4Q8N228 414 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 ARMC10Q8N2F6 343 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 LRRN4CLQ8ND94 238 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 KCTD13Q8WZ19 329 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 NDRG1Q92597 394 aaKnown RBP6.08□□□□□ -1.44
CSDE1-207ENST00000483407 SEMA4DQ92854 862 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 RCC1LQ96I51 464 aaKnown RBP6.08□□□□□ -1.44
CSDE1-207ENST00000483407 TSG101Q99816 390 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 PRSS16Q9NQE7 514 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 C1GALT1Q9NS00 363 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 FBXL12Q9NXK8 326 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 KIAA1257Q9ULG3 409 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 TPX2Q9ULW0 747 aaKnown RBP6.08□□□□□ -1.44
CSDE1-207ENST00000483407 PLAAQ9Y263 795 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 PCDHGA1Q9Y5H4 931 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 FREM2Q5SZK8 3169 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 A0A087WV48 116 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 A0A1B0GTQ1 180 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 FAM149AA5PLN7 773 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 YJEFN3A6XGL0 299 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 CYSRT1A8MQ03 144 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 E7ENQ6 273 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 O00370 1275 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 KCNK3O14649 394 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 MSI1O43347 362 aaKnown RBP6.07□□□□□ -1.44
CSDE1-207ENST00000483407 ACSL4O60488 711 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 TBL1XO60907 577 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 PPM1BO75688 479 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 MOCS3O95396 460 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 ITGAVP06756 1048 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 LCP1P13796 627 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 JUPP14923 745 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 ABCB4P21439 1286 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 MAP4P27816 1152 aaKnown RBP6.07□□□□□ -1.44
CSDE1-207ENST00000483407 CD70P32970 193 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 CTSKP43235 329 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 ABCG1P45844 678 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 ARRB1P49407 418 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-207ENST00000483407 NDUFA8P51970 172 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 TBX4P57082 545 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 DAOAP59103 153 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 PPP2R2AP63151 447 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 IL9RQ01113 521 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 CDH18Q13634 790 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 PKP1Q13835 747 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 HNRNPA1L2Q32P51 320 aaKnown RBP6.07□□□□□ -1.44
CSDE1-207ENST00000483407 SLC45A4Q5BKX6 768 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 PIK3R6Q5UE93 754 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 RNF219Q5W0B1 726 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-207ENST00000483407 MSANTD2Q6P1R3 559 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 RFWD3Q6PCD5 774 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 NCEH1Q6PIU2 408 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 LCLAT1Q6UWP7 414 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 DHRS13Q6UX07 377 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 KRBA2Q6ZNG9 492 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 BHLHA9Q7RTU4 235 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 FAM20CQ8IXL6 584 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 KDM1BQ8NB78 822 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 HJURPQ8NCD3 748 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-207ENST00000483407 BVESQ8NE79 360 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 OR2T34Q8NGX1 318 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 FIBINQ8TAL6 211 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 UBA3Q8TBC4 463 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 IRGQQ8WZA9 623 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 UTP4Q969X6 686 aaKnown RBP6.07□□□□□ -1.44
CSDE1-207ENST00000483407 AZIN2Q96A70 460 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 TTC17Q96AE7 1141 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 NXPE2Q96DL1 559 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 EEF2KMTQ96G04 330 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 EXOC2Q96KP1 924 aa6.07□□□□□ -1.44
CSDE1-207ENST00000483407 ELF4Q99607 663 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-207ENST00000483407 OMDQ99983 421 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms