RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 RTP5Q14D33 572 aa16.86■□□□□ 0.29
RAB11FIP3-209ENST00000483002 POLD3Q15054 466 aaPredicted RBP16.86■□□□□ 0.29
RAB11FIP3-209ENST00000483002 KDM7AQ6ZMT4 941 aa16.86■□□□□ 0.29
RAB11FIP3-209ENST00000483002 TRIM72Q6ZMU5 477 aa16.86■□□□□ 0.29
RAB11FIP3-209ENST00000483002 STRADAQ7RTN6 431 aa16.86■□□□□ 0.29
RAB11FIP3-209ENST00000483002 NLRP14Q86W24 1093 aa16.86■□□□□ 0.29
RAB11FIP3-209ENST00000483002 DCP2Q8IU60 420 aaKnown RBP16.86■□□□□ 0.29
RAB11FIP3-209ENST00000483002 CCDC185Q8N715 623 aa16.86■□□□□ 0.29
RAB11FIP3-209ENST00000483002 FAM174AQ8TBP5 190 aa16.86■□□□□ 0.29
RAB11FIP3-209ENST00000483002 FAM172AQ8WUF8 416 aa16.86■□□□□ 0.29
RAB11FIP3-209ENST00000483002 ISG20Q96AZ6 181 aaKnown RBP16.86■□□□□ 0.29
RAB11FIP3-209ENST00000483002 PCMTD1Q96MG8 357 aaPredicted RBP16.86■□□□□ 0.29
RAB11FIP3-209ENST00000483002 MAGEH1Q9H213 219 aa16.86■□□□□ 0.29
RAB11FIP3-209ENST00000483002 LMBRD1Q9NUN5 540 aa16.86■□□□□ 0.29
RAB11FIP3-209ENST00000483002 TMEM248Q9NWD8 314 aa16.86■□□□□ 0.29
RAB11FIP3-209ENST00000483002 ADAM22Q9P0K1 906 aa16.86■□□□□ 0.29
RAB11FIP3-209ENST00000483002 IPO11Q9UI26 975 aaKnown RBP16.86■□□□□ 0.29
RAB11FIP3-209ENST00000483002 NEMP2A6NFY4 417 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 IGLON5A6NGN9 336 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 TLX3O43711 291 aaPredicted RBP16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 AP1G1O43747 822 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 NEBLO76041 1014 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 MT-CO3P00414 261 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 GIMD1P0DJR0 217 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 ALPPL2P10696 532 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 UNGP13051 313 aaPredicted RBP16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 ITPKBP27987 946 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 ABCG1P45844 678 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 NSFP46459 744 aaKnown RBP16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 HDAC4P56524 1084 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 GEMIN4P57678 1058 aaKnown RBP16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 SNRPD1P62314 119 aaKnown RBP16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 PTP4A2Q12974 167 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 ZNF805Q5CZA5 627 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 ZNF354CQ86Y25 554 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 PLPP6Q8IY26 295 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 RFFLQ8WZ73 363 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 CENPIQ92674 756 aaPredicted RBP16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 TBC1D31Q96DN5 1066 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 IFT43Q96FT9 208 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 SELENOOQ9BVL4 669 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 RETREG1Q9H6L5 497 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 SIK3Q9Y2K2 1263 aa16.85■□□□□ 0.29
RAB11FIP3-209ENST00000483002 IGSF10Q6WRI0 2623 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 FPGTO14772 594 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 SCAMP1O15126 338 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 TSPAN6O43657 245 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 RAMP2O60895 175 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 POP4O95707 220 aaKnown RBP16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 UGT2B4P06133 528 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 GPD1P21695 349 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 EIF2S3P41091 472 aaKnown RBP16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 ABL2P42684 1182 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 HNRNPKP61978 463 aaKnown RBP eCLIP16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 FZD2Q14332 565 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 SYCP1Q15431 976 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 MYLK3Q32MK0 819 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 ATXN7L2Q5T6C5 722 aaPredicted RBP16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 SCYL2Q6P3W7 929 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 WDR59Q6PJI9 974 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 KYAT3Q6YP21 454 aaKnown RBP16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 LRRC69Q6ZNQ3 347 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 CACTIN-AS1Q8N1I8 211 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 DCBLD1Q8N8Z6 715 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 OR2AP1Q8NGE2 309 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 RAB7BQ96AH8 199 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 APOLD1Q96LR9 279 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 KLHL32Q96NJ5 620 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 C1QTNF2Q9BXJ5 285 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 SEPT11Q9NVA2 429 aaKnown RBP16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 NLGN3Q9NZ94 848 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 GGT7Q9UJ14 662 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 ITM2BQ9Y287 266 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 CHD5Q8TDI0 1954 aa16.84■□□□□ 0.29
RAB11FIP3-209ENST00000483002 SPTY2D1-AS1A0A0U1RR47 76 aa16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 CXorf51AA0A1B0GTR3 108 aa16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 K7ESM1 405 aa16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 RRP8O43159 456 aaKnown RBP16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 BUB1O43683 1085 aa16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 KDELR3O43731 214 aa16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 BRINP1O60477 761 aa16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 GSRP00390 522 aa16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 CKMT1AP12532 417 aa16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 RABIFP47224 123 aa16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 COPB1P53618 953 aaKnown RBP16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 PDE1CQ14123 709 aaPredicted RBP16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 ACAP1Q15027 740 aa16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 CLEC16AQ2KHT3 1053 aa16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 SLFN11Q7Z7L1 901 aa16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 TTC7BQ86TV6 843 aa16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 PYROXD2Q8N2H3 581 aa16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 NETO2Q8NC67 525 aa16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 NEK11Q8NG66 645 aa16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 BBC3Q96PG8 261 aaPredicted RBP16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 LENG8Q96PV6 779 aaPredicted RBP16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 KLF6Q99612 283 aaPredicted RBP16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 NEU3Q9UQ49 428 aa16.83■□□□□ 0.28
RAB11FIP3-209ENST00000483002 SIGLEC16A6NMB1 481 aa16.82■□□□□ 0.28
RAB11FIP3-209ENST00000483002 H3BM21 787 aa16.82■□□□□ 0.28
RAB11FIP3-209ENST00000483002 OPA1O60313 960 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms