RNA–Protein interactions for RNA: ENST00000482229.1

NEPRO-216, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 2

Gene NEPRO, Length 814 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-216ENST00000482229 SF3A3Q12874 501 aaKnown RBP eCLIP3.36□□□□□ -1.87
NEPRO-216ENST00000482229 ZNF569Q5MCW4 686 aa3.36□□□□□ -1.87
NEPRO-216ENST00000482229 RAB11FIP2Q7L804 512 aa3.36□□□□□ -1.87
NEPRO-216ENST00000482229 TRMT1LQ7Z2T5 733 aaKnown RBP3.36□□□□□ -1.87
NEPRO-216ENST00000482229 MDGA2Q7Z553 956 aa3.36□□□□□ -1.87
NEPRO-216ENST00000482229 SLC44A2Q8IWA5 706 aaPredicted RBP3.36□□□□□ -1.87
NEPRO-216ENST00000482229 CSGALNACT1Q8TDX6 532 aa3.36□□□□□ -1.87
NEPRO-216ENST00000482229 AFG1LQ8WV93 481 aa3.36□□□□□ -1.87
NEPRO-216ENST00000482229 SORCS1Q8WY21 1168 aa3.36□□□□□ -1.87
NEPRO-216ENST00000482229 NPIPB3Q92617 1050 aa3.36□□□□□ -1.87
NEPRO-216ENST00000482229 GOLGA1Q92805 767 aa3.36□□□□□ -1.87
NEPRO-216ENST00000482229 CD101Q93033 1021 aa3.36□□□□□ -1.87
NEPRO-216ENST00000482229 RILPL2Q969X0 211 aa3.36□□□□□ -1.87
NEPRO-216ENST00000482229 EID2BQ96D98 161 aa3.36□□□□□ -1.87
NEPRO-216ENST00000482229 REXO5Q96IC2 774 aaKnown RBP3.36□□□□□ -1.87
NEPRO-216ENST00000482229 ADAD1Q96M93 576 aaKnown RBP3.36□□□□□ -1.87
NEPRO-216ENST00000482229 TRAPPC9Q96Q05 1148 aa3.36□□□□□ -1.87
NEPRO-216ENST00000482229 PABPC3Q9H361 631 aaKnown RBP3.36□□□□□ -1.87
NEPRO-216ENST00000482229 SRP68Q9UHB9 627 aaKnown RBP3.36□□□□□ -1.87
NEPRO-216ENST00000482229 RAB21Q9UL25 225 aa3.36□□□□□ -1.87
NEPRO-216ENST00000482229 DAPP1Q9UN19 280 aa3.36□□□□□ -1.87
NEPRO-216ENST00000482229 CNTN6Q9UQ52 1028 aa3.36□□□□□ -1.87
NEPRO-216ENST00000482229 FAM172BPA6NC97 362 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 H0Y3Z8 333 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 DHHO43323 396 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 ZNF500O60304 480 aaPredicted RBP3.35□□□□□ -1.87
NEPRO-216ENST00000482229 SERPINI2O75830 405 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 ALDOCP09972 364 aaKnown RBP3.35□□□□□ -1.87
NEPRO-216ENST00000482229 PPP3CCP48454 512 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 PNLIPRP1P54315 467 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 PHEXP78562 749 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 PDCLQ13371 301 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 ADCK5Q3MIX3 580 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 NFRKBQ6P4R8 1299 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 TRABD2AQ86V40 505 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 IGFN1Q86VF2 1251 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 C2CD5Q86YS7 1000 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 ANKRD44Q8N8A2 993 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 ZNF114Q8NC26 417 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 CMASQ8NFW8 434 aaPredicted RBP3.35□□□□□ -1.87
NEPRO-216ENST00000482229 OTUD7AQ8TE49 926 aaPredicted RBP3.35□□□□□ -1.87
NEPRO-216ENST00000482229 PPM1EQ8WY54 764 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 FAR2Q96K12 515 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 ISCA1Q9BUE6 129 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 MECRQ9BV79 373 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 EVA1AQ9H8M9 152 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 SAYSD1Q9NPB0 183 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 KCNK9Q9NPC2 374 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 MALT1Q9UDY8 824 aa3.35□□□□□ -1.87
NEPRO-216ENST00000482229 TRPC5Q9UL62 973 aaPredicted RBP3.35□□□□□ -1.87
NEPRO-216ENST00000482229 UBE2J1Q9Y385 318 aaPredicted RBP3.35□□□□□ -1.87
NEPRO-216ENST00000482229 TBC1D3DA0A087WVF3 549 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 TBC1D3IA0A087WXS9 549 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 TBC1D3EA0A087X179 549 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 TBC1D3KA0A087X1G2 549 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 GXYLT2A0PJZ3 443 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 CCDC189A1A4V9 331 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 TBC1D3BA6NDS4 549 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 TBC1D3FA6NER0 549 aaPredicted RBP3.34□□□□□ -1.87
NEPRO-216ENST00000482229 TBC1D3LB9A6J9 549 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 TBC1D3HP0C7X1 549 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 RXRAP19793 462 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 SERPINA4P29622 427 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 CDKN1AP38936 164 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 MAPK9P45984 424 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 CCT5P48643 541 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 PPFIA1Q13136 1202 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 CUL4BQ13620 913 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 TAF12Q16514 161 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 GALNTL6Q49A17 601 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 HSP90AB4PQ58FF6 505 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 TBC1D3GQ6DHY5 549 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 TANGO2Q6ICL3 276 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 TBC1D3CQ6IPX1 549 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 WDR93Q6P2C0 686 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 GDPD4Q6W3E5 623 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 SYT13Q7L8C5 426 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 MOGAT3Q86VF5 341 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 ANKRD18AQ8IVF6 992 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 FTSJ3Q8IY81 847 aaKnown RBP3.34□□□□□ -1.87
NEPRO-216ENST00000482229 SMAP1Q8IYB5 467 aaPredicted RBP3.34□□□□□ -1.87
NEPRO-216ENST00000482229 TBC1D3Q8IZP1 549 aaPredicted RBP3.34□□□□□ -1.87
NEPRO-216ENST00000482229 LRRC57Q8N9N7 239 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 MAPK1IP1LQ8NDC0 245 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 TMEM163Q8TC26 289 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 CPT1BQ92523 772 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 ZSCAN31Q96LW9 406 aaPredicted RBP3.34□□□□□ -1.87
NEPRO-216ENST00000482229 ZNF696Q9H7X3 374 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 LIN7CQ9NUP9 197 aaKnown RBP3.34□□□□□ -1.87
NEPRO-216ENST00000482229 RRN3Q9NYV6 651 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 KIF17Q9P2E2 1029 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 KCND3Q9UK17 655 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 NFU1Q9UMS0 254 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 C19orf53Q9UNZ5 99 aaPredicted RBP3.34□□□□□ -1.87
NEPRO-216ENST00000482229 GPR52Q9Y2T5 361 aa3.34□□□□□ -1.87
NEPRO-216ENST00000482229 FAM90A18PA6NE21 464 aa3.33□□□□□ -1.88
NEPRO-216ENST00000482229 FAM90A16PA6NEW6 464 aa3.33□□□□□ -1.88
NEPRO-216ENST00000482229 AGAP5A6NIR3 686 aa3.33□□□□□ -1.88
NEPRO-216ENST00000482229 FAM90A9PA6NNJ1 464 aa3.33□□□□□ -1.88
NEPRO-216ENST00000482229 SLC38A8A6NNN8 435 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms