RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 SMG7Q92540 1137 aaKnown RBP7.88□□□□□ -1.15
LINC00888-203ENST00000482098 HAS1Q92839 578 aa7.88□□□□□ -1.15
LINC00888-203ENST00000482098 MTMR9Q96QG7 549 aa7.88□□□□□ -1.15
LINC00888-203ENST00000482098 TMEM175Q9BSA9 504 aa7.88□□□□□ -1.15
LINC00888-203ENST00000482098 CENPOQ9BU64 300 aa7.88□□□□□ -1.15
LINC00888-203ENST00000482098 SCAND2PQ9GZW5 306 aaPredicted RBP7.88□□□□□ -1.15
LINC00888-203ENST00000482098 NT5C3AQ9H0P0 336 aa7.88□□□□□ -1.15
LINC00888-203ENST00000482098 PCDHAC1Q9H158 963 aa7.88□□□□□ -1.15
LINC00888-203ENST00000482098 NRDE2Q9H7Z3 1164 aa7.88□□□□□ -1.15
LINC00888-203ENST00000482098 KCNMB3Q9NPA1 279 aa7.88□□□□□ -1.15
LINC00888-203ENST00000482098 TBC1D13Q9NVG8 400 aa7.88□□□□□ -1.15
LINC00888-203ENST00000482098 NKIRAS2Q9NYR9 191 aa7.88□□□□□ -1.15
LINC00888-203ENST00000482098 GPR34Q9UPC5 381 aa7.88□□□□□ -1.15
LINC00888-203ENST00000482098 NBEAQ8NFP9 2946 aa7.88□□□□□ -1.15
LINC00888-203ENST00000482098 F5P12259 2224 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 A0A1W2PPH5 198 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 PPP6R2O75170 966 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 URODP06132 367 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 GRPP07492 148 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 DARSP14868 501 aaKnown RBP7.87□□□□□ -1.15
LINC00888-203ENST00000482098 BTF3P20290 206 aaKnown RBP7.87□□□□□ -1.15
LINC00888-203ENST00000482098 ACVR2AP27037 513 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 HOXD12P35452 270 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 KRT20P35900 424 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 UCP3P55916 312 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 NLRP11P59045 1033 aaKnown RBP7.87□□□□□ -1.15
LINC00888-203ENST00000482098 DUSP2Q05923 314 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 PHF19Q5T6S3 580 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 LCE2AQ5TA79 106 aaPredicted RBP7.87□□□□□ -1.15
LINC00888-203ENST00000482098 LRCH2Q5VUJ6 765 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 ZNF852Q6ZMS4 543 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 ZNF572Q7Z3I7 529 aaPredicted RBP7.87□□□□□ -1.15
LINC00888-203ENST00000482098 LINC01465Q8N7H1 131 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 RNF169Q8NCN4 708 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 CPA5Q8WXQ8 436 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 CFHR4Q92496 578 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 FAM20AQ96MK3 541 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 CLIC6Q96NY7 704 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 MAP7D2Q96T17 732 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 RBM15Q96T37 977 aaKnown RBP eCLIP7.87□□□□□ -1.15
LINC00888-203ENST00000482098 ZNF577Q9BSK1 485 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 VN1R3Q9BXE9 311 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 CCDC68Q9H2F9 335 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 PCDH18Q9HCL0 1135 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 PRDM8Q9NQV8 689 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 PRDM7Q9NQW5 492 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 ANKEF1Q9NU02 776 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 TMEM160Q9NX00 188 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 CDC42EP3Q9UKI2 254 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 RCOR1Q9UKL0 485 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 CDH7Q9ULB5 785 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 MTF2Q9Y483 593 aaPredicted RBP7.87□□□□□ -1.15
LINC00888-203ENST00000482098 FREM2Q5SZK8 3169 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 DOCK8Q8NF50 2099 aa7.87□□□□□ -1.15
LINC00888-203ENST00000482098 VWA3AA6NCI4 1184 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 PGPEP1LA6NFU8 196 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 RAB27BO00194 218 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 ABLIM1O14639 778 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 TEX28O15482 410 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 PLOD3O60568 738 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 PSMD10O75832 226 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 USP1O94782 785 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 RTN3O95197 1032 aaPredicted RBP7.86□□□□□ -1.15
LINC00888-203ENST00000482098 VTNP04004 478 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 TK1P04183 234 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 TXKP42681 527 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 ME1P48163 572 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 SLC11A1P49279 550 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 CCR3P51677 355 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 PRKAA2P54646 552 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 ALDH18A1P54886 795 aaKnown RBP7.86□□□□□ -1.15
LINC00888-203ENST00000482098 RNASELQ05823 741 aaKnown RBP7.86□□□□□ -1.15
LINC00888-203ENST00000482098 ITGB3BPQ13352 177 aaPredicted RBP7.86□□□□□ -1.15
LINC00888-203ENST00000482098 FZD5Q13467 585 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 LRP8Q14114 963 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 IL17AQ16552 155 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 MSMPQ1L6U9 139 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 VWA3BQ502W6 1294 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.86□□□□□ -1.15
LINC00888-203ENST00000482098 ADGRF1Q5T601 910 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 MFSD4BQ5TF39 518 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 HAUS3Q68CZ6 603 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 MIS18BP1Q6P0N0 1132 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 CRTC1Q6UUV9 634 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 KIAA0408Q6ZU52 694 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 CLEC14AQ86T13 490 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 PDSS2Q86YH6 399 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 LILRA3Q8N6C8 439 aaPredicted RBP7.86□□□□□ -1.15
LINC00888-203ENST00000482098 METTL13Q8N6R0 699 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 FGF14Q92915 247 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 ZUFSPQ96AP4 578 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 RIT2Q99578 217 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 HERC2P3Q9BVR0 1158 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 TEKT3Q9BXF9 490 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 AP1M1Q9BXS5 423 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 MS4A7Q9GZW8 240 aaPredicted RBP7.86□□□□□ -1.15
LINC00888-203ENST00000482098 PAIP1Q9H074 479 aaKnown RBP7.86□□□□□ -1.15
LINC00888-203ENST00000482098 TTC12Q9H892 705 aaPredicted RBP7.86□□□□□ -1.15
LINC00888-203ENST00000482098 ZNF302Q9NR11 478 aa7.86□□□□□ -1.15
LINC00888-203ENST00000482098 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms