RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 CYTH1Q15438 398 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 HIF1AQ16665 826 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 FUT11Q495W5 492 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 LRRC8BQ6P9F7 803 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 TRMT10CQ7L0Y3 403 aaKnown RBP10.31□□□□□ -0.76
USP39-215ENST00000481409 PHTF2Q8N3S3 785 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 SLC44A3Q8N4M1 653 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 ATP11CQ8NB49 1132 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 NETO2Q8NC67 525 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 ARRDC2Q8TBH0 407 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 HCAR2Q8TDS4 363 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 ZFYVE19Q96K21 471 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 GDAP1L1Q96MZ0 367 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 FSD1LQ9BXM9 530 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 CPEB1Q9BZB8 566 aaKnown RBP10.31□□□□□ -0.76
USP39-215ENST00000481409 ELOVL2Q9NXB9 296 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 CLEC4EQ9ULY5 219 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 RPL26L1Q9UNX3 145 aaKnown RBP10.31□□□□□ -0.76
USP39-215ENST00000481409 ERVW-1Q9UQF0 538 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 STARD13Q9Y3M8 1113 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 MYOFQ9NZM1 2061 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 ATP8B1O43520 1251 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 SNAP91O60641 907 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 SOCS5O75159 536 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 SPAG6O75602 509 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 KAT7O95251 611 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 POP4O95707 220 aaKnown RBP10.3□□□□□ -0.76
USP39-215ENST00000481409 GSTA2P09210 222 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 SRFP11831 508 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 SRCP12931 536 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 HNRNPLP14866 589 aaKnown RBP eCLIP10.3□□□□□ -0.76
USP39-215ENST00000481409 HLA-DPA1P20036 260 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 DRD1P21728 446 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 GLDCP23378 1020 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 NFKBIAP25963 317 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 OPRD1P41143 372 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 MAGEA3P43357 314 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 RECQLP46063 649 aaPredicted RBP10.3□□□□□ -0.76
USP39-215ENST00000481409 ITKQ08881 620 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 CDH17Q12864 832 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 TDGQ13569 410 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 HSF5Q4G112 596 aaPredicted RBP10.3□□□□□ -0.76
USP39-215ENST00000481409 ASTLQ6HA08 431 aaPredicted RBP10.3□□□□□ -0.76
USP39-215ENST00000481409 B4GALNT4Q76KP1 1039 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 ADHFE1Q8IWW8 467 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 PDCD7Q8N8D1 485 aaKnown RBP10.3□□□□□ -0.76
USP39-215ENST00000481409 NAT16Q8N8M0 369 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 TSEN2Q8NCE0 465 aaKnown RBP10.3□□□□□ -0.76
USP39-215ENST00000481409 OR2AP1Q8NGE2 309 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 MAFAQ8NHW3 353 aaPredicted RBP10.3□□□□□ -0.76
USP39-215ENST00000481409 USP33Q8TEY7 942 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 PTCD2Q8WV60 388 aaKnown RBP10.3□□□□□ -0.76
USP39-215ENST00000481409 FEM1CQ96JP0 617 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 SERPINB12Q96P63 405 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 RBM15Q96T37 977 aaKnown RBP eCLIP10.3□□□□□ -0.76
USP39-215ENST00000481409 SEMA3CQ99985 751 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 P2RY13Q9BPV8 354 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 C19orf43Q9BQ61 176 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 ADGRE3Q9BY15 652 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 EPC1Q9H2F5 836 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 SCUBE2Q9NQ36 999 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 CASS4Q9NQ75 786 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 GTSE1Q9NYZ3 720 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 BFARQ9NZS9 450 aa10.3□□□□□ -0.76
USP39-215ENST00000481409 MYO18AQ92614 2054 aaKnown RBP10.3□□□□□ -0.76
USP39-215ENST00000481409 CDH23Q9H251 3354 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 LOC285095A0A1B0GVY8 99 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 TBC1D3BA6NDS4 549 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 OTOL1A6NHN0 477 aaPredicted RBP10.29□□□□□ -0.76
USP39-215ENST00000481409 WASH3PC4AMC7 463 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 MAN2B1O00754 1011 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 ALOX15BO15296 676 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 GALR2O43603 387 aaPredicted RBP10.29□□□□□ -0.76
USP39-215ENST00000481409 FGF1P05230 155 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 ALADP13716 330 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 ADRA1AP35348 466 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 NRLP54845 237 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 SKOR1P84550 965 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 GEN1Q17RS7 908 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 FBXO43Q4G163 708 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 CARD16Q5EG05 197 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 BEND6Q5SZJ8 279 aaPredicted RBP10.29□□□□□ -0.76
USP39-215ENST00000481409 CFAP58Q5T655 872 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 C22orf39Q6P5X5 142 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 NCEH1Q6PIU2 408 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 KDELC1Q6UW63 502 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 RANBP10Q6VN20 620 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 CYS1Q717R9 158 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 TRMT11Q7Z4G4 463 aaKnown RBP10.29□□□□□ -0.76
USP39-215ENST00000481409 TMC3Q7Z5M5 1100 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 CROCCP2Q86T23 111 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 SRLQ86TD4 932 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 PRUNE1Q86TP1 453 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 PRPF39Q86UA1 669 aaKnown RBP10.29□□□□□ -0.76
USP39-215ENST00000481409 C12orf40Q86WS4 652 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 NDUFAF2Q8N183 169 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 PGBD5Q8N414 524 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 LRRN4Q8WUT4 740 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 PPM1EQ8WY54 764 aa10.29□□□□□ -0.76
USP39-215ENST00000481409 PEX13Q92968 403 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms