RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 POLE2P56282 527 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 CLDN2P57739 230 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 PAK1Q13153 545 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 ARHGAP44Q17R89 818 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 KIF26BQ2KJY2 2108 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 ZNF284Q2VY69 593 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 ALFQ53S48 1182 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 EFHC1Q5JVL4 640 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 ZCCHC8Q6NZY4 707 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 TRIM65Q6PJ69 517 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 C11orf57Q6ZUT1 292 aaPredicted RBP9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 HORMAD1Q86X24 394 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 ZSCAN1Q8NBB4 408 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 CHST14Q8NCH0 376 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 C1orf131Q8NDD1 294 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 ZNF548Q8NEK5 533 aaPredicted RBP9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 OR2A12Q8NGT7 310 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 SHC3Q92529 594 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 PHF12Q96QT6 1004 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 PSMB7Q99436 277 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 DUSP23Q9BVJ7 150 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 SIK2Q9H0K1 926 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 MUC3BQ9H195 1237 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 ADNPQ9H2P0 1102 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 ANLNQ9NQW6 1124 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 ZNF71Q9NQZ8 489 aaPredicted RBP9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 PIGVQ9NUD9 493 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 DNAJC28Q9NX36 388 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 VPS51Q9UID3 782 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 SNX10Q9Y5X0 201 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 CENPEQ02224 2701 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 EME2A4GXA9 379 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 NEMP2A6NFY4 417 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 I6L893 689 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 RNF103O00237 685 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 MTSS1O43312 755 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 SMAD6O43541 496 aaKnown RBP9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 AGFG2O95081 481 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 ADCY5O95622 1261 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 TFE3P19532 575 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 SLC9A1P19634 815 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 RRM1P23921 792 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 COL8A1P27658 744 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 AKT2P31751 481 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 CHRNA3P32297 505 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 UQCRFS1P47985 274 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 CDH4P55283 916 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 MTA1Q13330 715 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 SPIDRQ14159 915 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 DEFB133Q30KQ1 61 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 C5orf22Q49AR2 442 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 PTPN20Q4JDL3 420 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 SEL1L3Q68CR1 1132 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 OR6B2Q6IFH4 312 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 NEK5Q6P3R8 708 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 BORAQ6PGQ7 559 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 SLC26A9Q7LBE3 791 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 ZFAND4Q86XD8 727 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 ZNF683Q8IZ20 524 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 FBXO39Q8N4B4 442 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 ATP11CQ8NB49 1132 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 GRIN3AQ8TCU5 1115 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 MIB2Q96AX9 1013 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 C2orf49Q9BVC5 232 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 FOXP3Q9BZS1 431 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 TMPRSS4Q9NRS4 437 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 APEX2Q9UBZ4 518 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 PISDQ9UG56 409 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 ANAPC2Q9UJX6 822 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 ACSL6Q9UKU0 697 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 PCDHGC3Q9UN70 934 aa9.62□□□□□ -0.87
SMARCE1-210ENST00000481231 ITPR3Q14573 2671 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 A0A0D9SEW6 157 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 PRAMEF33A0A0G2JMD5 474 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 M0QYT0 321 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 PRAMEF10O60809 474 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 PRNPP04156 253 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 RHOCP08134 193 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 ITIH1P19827 911 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 HNRNPA2B1P22626 353 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 TNFRSF8P28908 595 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 NOS2P35228 1153 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 CXCR3P49682 368 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 CLCN6P51797 869 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 KRT83P78385 493 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 SLC6A3Q01959 620 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 C1QBPQ07021 282 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 NR0B2Q15466 257 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 TMEM259Q4ZIN3 620 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 ARTNQ5T4W7 220 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 C22orf39Q6P5X5 142 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 LINGO4Q6UY18 593 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 GBP6Q6ZN66 633 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 GCNT7Q6ZNI0 430 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 ERN2Q76MJ5 926 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 RAB11FIP2Q7L804 512 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 PTAR1Q7Z6K3 402 aaPredicted RBP9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 TFAP2DQ7Z6R9 452 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 ABI3BPQ7Z7G0 1075 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 DCAF4L2Q8NA75 395 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms