RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 VOPP1Q96AW1 172 aa20.66■□□□□ 0.9
CTSA-206ENST00000480961 HAUS1Q96CS2 278 aa20.66■□□□□ 0.9
CTSA-206ENST00000480961 RBM41Q96IZ5 413 aaKnown RBP20.66■□□□□ 0.9
CTSA-206ENST00000480961 HERPUD2Q9BSE4 406 aa20.66■□□□□ 0.9
CTSA-206ENST00000480961 CINPQ9BW66 212 aaPredicted RBP20.66■□□□□ 0.9
CTSA-206ENST00000480961 SCML1Q9UN30 329 aa20.66■□□□□ 0.9
CTSA-206ENST00000480961 DDX3YO15523 660 aaKnown RBP20.65■□□□□ 0.9
CTSA-206ENST00000480961 POP4O95707 220 aaKnown RBP20.65■□□□□ 0.9
CTSA-206ENST00000480961 UGT2B4P06133 528 aa20.65■□□□□ 0.9
CTSA-206ENST00000480961 PECAM1P16284 738 aaPredicted RBP20.65■□□□□ 0.9
CTSA-206ENST00000480961 ZFXP17010 805 aaPredicted RBP20.65■□□□□ 0.9
CTSA-206ENST00000480961 TFDP2Q14188 446 aa20.65■□□□□ 0.9
CTSA-206ENST00000480961 LAIR1Q6GTX8 287 aa20.65■□□□□ 0.9
CTSA-206ENST00000480961 USP30Q70CQ3 517 aa20.65■□□□□ 0.9
CTSA-206ENST00000480961 SLC41A1Q8IVJ1 513 aa20.65■□□□□ 0.9
CTSA-206ENST00000480961 PLPP6Q8IY26 295 aa20.65■□□□□ 0.9
CTSA-206ENST00000480961 OR14C36Q8NHC7 312 aa20.65■□□□□ 0.9
CTSA-206ENST00000480961 ZNF599Q96NL3 588 aa20.65■□□□□ 0.9
CTSA-206ENST00000480961 LGMNQ99538 433 aa20.65■□□□□ 0.9
CTSA-206ENST00000480961 BTBD1Q9H0C5 482 aa20.65■□□□□ 0.9
CTSA-206ENST00000480961 C6orf106Q9H6K1 298 aaPredicted RBP20.65■□□□□ 0.9
CTSA-206ENST00000480961 NCDNQ9UBB6 729 aa20.65■□□□□ 0.9
CTSA-206ENST00000480961 SEPT3Q9UH03 358 aa20.65■□□□□ 0.9
CTSA-206ENST00000480961 GFRA3O60609 400 aa20.64■□□□□ 0.89
CTSA-206ENST00000480961 MX2P20592 715 aa20.64■□□□□ 0.89
CTSA-206ENST00000480961 ZNF235Q14590 738 aa20.64■□□□□ 0.89
CTSA-206ENST00000480961 RFTN1Q14699 578 aaPredicted RBP20.64■□□□□ 0.89
CTSA-206ENST00000480961 ZNF662Q6ZS27 426 aa20.64■□□□□ 0.89
CTSA-206ENST00000480961 PGBD5Q8N414 524 aa20.64■□□□□ 0.89
CTSA-206ENST00000480961 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.64■□□□□ 0.89
CTSA-206ENST00000480961 UBL4BQ8N7F7 174 aa20.64■□□□□ 0.89
CTSA-206ENST00000480961 NSMCE1Q8WV22 266 aa20.64■□□□□ 0.89
CTSA-206ENST00000480961 ZNF419Q96HQ0 510 aaPredicted RBP20.64■□□□□ 0.89
CTSA-206ENST00000480961 HSPA12BQ96MM6 686 aa20.64■□□□□ 0.89
CTSA-206ENST00000480961 HINFPQ9BQA5 517 aa20.64■□□□□ 0.89
CTSA-206ENST00000480961 ARRDC1-AS1Q9H2J1 176 aa20.64■□□□□ 0.89
CTSA-206ENST00000480961 SDK1Q7Z5N4 2213 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 PIGNO95427 931 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 SEMA4FO95754 770 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 ITPKAP23677 461 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 MAOBP27338 520 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 MAXP61244 160 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 CREB5Q02930 508 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 SFSWAPQ12872 951 aaKnown RBP20.63■□□□□ 0.89
CTSA-206ENST00000480961 MARC1Q5VT66 337 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 GDPD4Q6W3E5 623 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 SRLQ86TD4 932 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 ALYREFQ86V81 257 aaKnown RBP20.63■□□□□ 0.89
CTSA-206ENST00000480961 LRRC49Q8IUZ0 686 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 HES6Q96HZ4 224 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 NSMCE3Q96MG7 304 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 KLHL32Q96NJ5 620 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 PSKH2Q96QS6 385 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 OSBPL8Q9BZF1 889 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 SMOC1Q9H4F8 434 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 SGK2Q9HBY8 427 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 NT5MQ9NPB1 228 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 DYRK4Q9NR20 520 aa20.63■□□□□ 0.89
CTSA-206ENST00000480961 TRMT1Q9NXH9 659 aaKnown RBP20.63■□□□□ 0.89
CTSA-206ENST00000480961 ATXN2Q99700 1313 aaKnown RBP20.62■□□□□ 0.89
CTSA-206ENST00000480961 NUP205Q92621 2012 aa20.62■□□□□ 0.89
CTSA-206ENST00000480961 MIF4GDA9UHW6 222 aaKnown RBP20.62■□□□□ 0.89
CTSA-206ENST00000480961 KCNK1O00180 336 aa20.62■□□□□ 0.89
CTSA-206ENST00000480961 MATN3O15232 486 aa20.62■□□□□ 0.89
CTSA-206ENST00000480961 CCNCP24863 283 aa20.62■□□□□ 0.89
CTSA-206ENST00000480961 MMP13P45452 471 aa20.62■□□□□ 0.89
CTSA-206ENST00000480961 SCNN1BP51168 640 aa20.62■□□□□ 0.89
CTSA-206ENST00000480961 ZNF33AQ06730 810 aa20.62■□□□□ 0.89
CTSA-206ENST00000480961 AP1B1Q10567 949 aa20.62■□□□□ 0.89
CTSA-206ENST00000480961 PPP2R5EQ16537 467 aa20.62■□□□□ 0.89
CTSA-206ENST00000480961 PIP5KL1Q5T9C9 394 aa20.62■□□□□ 0.89
CTSA-206ENST00000480961 AGBL4Q5VU57 503 aa20.62■□□□□ 0.89
CTSA-206ENST00000480961 LYSMD4Q5XG99 296 aa20.62■□□□□ 0.89
CTSA-206ENST00000480961 NCEH1Q6PIU2 408 aa20.62■□□□□ 0.89
CTSA-206ENST00000480961 PARS2Q7L3T8 475 aaKnown RBP20.62■□□□□ 0.89
CTSA-206ENST00000480961 CCDC13Q8IYE1 715 aa20.62■□□□□ 0.89
CTSA-206ENST00000480961 PIGKQ92643 395 aa20.62■□□□□ 0.89
CTSA-206ENST00000480961 TSGA13Q96PP4 275 aa20.62■□□□□ 0.89
CTSA-206ENST00000480961 GMEB2Q9UKD1 530 aa20.62■□□□□ 0.89
CTSA-206ENST00000480961 FZD4Q9ULV1 537 aa20.62■□□□□ 0.89
CTSA-206ENST00000480961 CHD5Q8TDI0 1954 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 NYNRINQ9P2P1 1898 aaKnown RBP20.61■□□□□ 0.89
CTSA-206ENST00000480961 C16orf96A6NNT2 1141 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 FSBPO95073 299 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 EPN2O95208 641 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 JCHAINP01591 159 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 RETP07949 1114 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 ADPRHP54922 357 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 TAS2R38P59533 333 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 COPS2P61201 443 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 RAD51Q06609 339 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 ITKQ08881 620 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 PDK1Q15118 436 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 LRRC73Q5JTD7 316 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 CCDC181Q5TID7 509 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 DCAF12L1Q5VU92 463 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 BBS12Q6ZW61 710 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 ERN2Q76MJ5 926 aaKnown RBP20.61■□□□□ 0.89
CTSA-206ENST00000480961 CYP2U1Q7Z449 544 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 CAMK1DQ8IU85 385 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms