RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 AP4E1Q9UPM8 1137 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 MFHAS1Q9Y4C4 1052 aa11.64□□□□□ -0.55
CCM2-213ENST00000480658 CNOT1A5YKK6 2376 aaKnown RBP11.64□□□□□ -0.55
CCM2-213ENST00000480658 PLXNA2O75051 1894 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 C1QTNF9BB2RNN3 333 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 EEF2KO00418 725 aaKnown RBP11.63□□□□□ -0.55
CCM2-213ENST00000480658 KRIT1O00522 736 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 ENC1O14682 589 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 DAPK3O43293 454 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 CREB3O43889 395 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 WNT1P04628 370 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 C1QTNF9P0C862 333 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 THEGLP0DJG4 465 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 XPAP23025 273 aaPredicted RBP11.63□□□□□ -0.55
CCM2-213ENST00000480658 PCK1P35558 622 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 HCAR3P49019 387 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 TAS2R38P59533 333 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 RHOAP61586 193 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 HNRNPKP61978 463 aaKnown RBP eCLIP11.63□□□□□ -0.55
CCM2-213ENST00000480658 FAM193AP78312 1265 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 ZNF211Q13398 564 aaPredicted RBP11.63□□□□□ -0.55
CCM2-213ENST00000480658 SERINC3Q13530 473 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 SMAD1Q15797 465 aaKnown RBP11.63□□□□□ -0.55
CCM2-213ENST00000480658 SKOR2Q2VWA4 1001 aaPredicted RBP11.63□□□□□ -0.55
CCM2-213ENST00000480658 POM121L1PQ3SYA9 428 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 TMEM259Q4ZIN3 620 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 ERMARDQ5T6L9 678 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 BRAT1Q6PJG6 821 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 LAYNQ6UX15 382 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 ABI3BPQ7Z7G0 1075 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 CACTIN-AS1Q8N1I8 211 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 BTN2A2Q8WVV5 523 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 ARRDC3Q96B67 414 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 CNDP2Q96KP4 475 aaKnown RBP11.63□□□□□ -0.55
CCM2-213ENST00000480658 TUBGCP5Q96RT8 1024 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 SLC17A9Q9BYT1 436 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 CPEB1Q9BZB8 566 aaKnown RBP11.63□□□□□ -0.55
CCM2-213ENST00000480658 HAUS4Q9H6D7 363 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 CCDC86Q9H6F5 360 aaKnown RBP11.63□□□□□ -0.55
CCM2-213ENST00000480658 TMPRSS4Q9NRS4 437 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 ZMIZ1Q9ULJ6 1067 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 NEU3Q9UQ49 428 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 FCF1Q9Y324 198 aaKnown RBP11.63□□□□□ -0.55
CCM2-213ENST00000480658 SNX10Q9Y5X0 201 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 SLCO1B1Q9Y6L6 691 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 ASCC3Q8N3C0 2202 aaKnown RBP11.63□□□□□ -0.55
CCM2-213ENST00000480658 DOCK4Q8N1I0 1966 aa11.63□□□□□ -0.55
CCM2-213ENST00000480658 CEP295Q9C0D2 2601 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 SPTBN2O15020 2390 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 A0A1W2PQ67 120 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 C16orf96A6NNT2 1141 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 ZNF821O75541 412 aaPredicted RBP11.62□□□□□ -0.55
CCM2-213ENST00000480658 TMCC1O94876 653 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 GLDCP23378 1020 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 SERPINB6P35237 376 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 ACVRL1P37023 503 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 HSPA9P38646 679 aaKnown RBP11.62□□□□□ -0.55
CCM2-213ENST00000480658 NUMBP49757 651 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 DUSP3P51452 185 aaPredicted RBP11.62□□□□□ -0.55
CCM2-213ENST00000480658 RPL7AP62424 266 aaKnown RBP11.62□□□□□ -0.55
CCM2-213ENST00000480658 E2F1Q01094 437 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 PIGHQ14442 188 aaPredicted RBP11.62□□□□□ -0.55
CCM2-213ENST00000480658 NR1I3Q14994 352 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 MYLK3Q32MK0 819 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 TDRD12Q587J7 1177 aaKnown RBP11.62□□□□□ -0.55
CCM2-213ENST00000480658 ERAP2Q6P179 960 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 GDPD4Q6W3E5 623 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 PARS2Q7L3T8 475 aaKnown RBP11.62□□□□□ -0.55
CCM2-213ENST00000480658 PARGQ86W56 976 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 BBS5Q8N3I7 341 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 PDCD7Q8N8D1 485 aaKnown RBP11.62□□□□□ -0.55
CCM2-213ENST00000480658 CHST14Q8NCH0 376 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 ATL2Q8NHH9 583 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 CXorf40AQ8TE69 158 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 NXPE2Q96DL1 559 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 TBATAQ96M53 351 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 ZNF641Q96N77 438 aaPredicted RBP11.62□□□□□ -0.55
CCM2-213ENST00000480658 SYT11Q9BT88 431 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 CALN1Q9BXU9 219 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 TM6SF2Q9BZW4 377 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 TOR4AQ9NXH8 423 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 KCTD5Q9NXV2 234 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 UBA2Q9UBT2 640 aaPredicted RBP11.62□□□□□ -0.55
CCM2-213ENST00000480658 FADS3Q9Y5Q0 445 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 KMT2BQ9UMN6 2715 aaPredicted RBP11.62□□□□□ -0.55
CCM2-213ENST00000480658 EPG5Q9HCE0 2579 aa11.62□□□□□ -0.55
CCM2-213ENST00000480658 TMEM191CA6NGB0 347 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 RASA4BC9J798 803 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 FAM72CH0Y354 149 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 SLC31A1O15431 190 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 TEX33O43247 280 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 RASA4O43374 803 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 FTLP02792 175 aaPredicted RBP11.61□□□□□ -0.55
CCM2-213ENST00000480658 UGT2B4P06133 528 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 GP1BAP07359 652 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 ATXN1LP0C7T5 689 aaKnown RBP11.61□□□□□ -0.55
CCM2-213ENST00000480658 CKMT2P17540 419 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 SPINK2P20155 84 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 ACP1P24666 158 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 SERPINA4P29622 427 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms