RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 RNF44Q7L0R7 432 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 ZNF571Q7Z3V5 609 aaPredicted RBP9.64□□□□□ -0.87
VEGFA-212ENST00000480614 SPATA13Q96N96 652 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 PIF1Q9H611 641 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 RAB23Q9ULC3 237 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.64□□□□□ -0.873e-16■□□□□ 9.2
VEGFA-212ENST00000480614 ARHGEF28Q8N1W1 1705 aaKnown RBP9.64□□□□□ -0.87
VEGFA-212ENST00000480614 WEE1P30291 646 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 OLR1P78380 273 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 CES5AQ6NT32 575 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 UNC93AQ86WB7 457 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 COLGALT2Q8IYK4 626 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 LINC00116Q8NCU8 138 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 TAS1R2Q8TE23 839 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 WDR12Q9GZL7 423 aaKnown RBP9.64□□□□□ -0.87
VEGFA-212ENST00000480614 MUC13Q9H3R2 512 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 PNPLA3Q9NST1 481 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 NAALADL1Q9UQQ1 740 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 MRPS33Q9Y291 106 aaKnown RBP9.64□□□□□ -0.87
VEGFA-212ENST00000480614 FMN2Q9NZ56 1722 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 BTN3A3O00478 584 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 NDST1P52848 882 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 TROAPQ12815 778 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 ZNF398Q8TD17 642 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 TTLL2Q9BWV7 592 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 RPL26L1Q9UNX3 145 aaKnown RBP9.64□□□□□ -0.87
VEGFA-212ENST00000480614 AREL1O15033 823 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 MGAT1P26572 445 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 CHN2P52757 468 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 ATP6V0D1P61421 351 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 FAM171A1Q5VUB5 890 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 SV2AQ7L0J3 742 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 RD3Q7Z3Z2 195 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 OSMRQ99650 979 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 ABHD16BQ9H3Z7 469 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 POMKQ9H5K3 350 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 ELL3Q9HB65 397 aaPredicted RBP9.64□□□□□ -0.87
VEGFA-212ENST00000480614 PTGES3LE9PB15 166 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 HAT1O14929 419 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 MAGEB3O15480 346 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 AKAP3O75969 853 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 FGF19O95750 216 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 ADSSP30520 456 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 PARP6Q2NL67 630 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 CDKAL1Q5VV42 579 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 CLVS1Q8IUQ0 354 aaPredicted RBP9.64□□□□□ -0.87
VEGFA-212ENST00000480614 TCAIMQ8N3R3 496 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 CXorf40AQ8TE69 158 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 HEXDCQ8WVB3 486 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 FAM136AQ96C01 138 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 APBA2Q99767 749 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 NECTIN3Q9NQS3 549 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 MORF4L1Q9UBU8 362 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 KPNA3O00505 521 aaPredicted RBP9.64□□□□□ -0.87
VEGFA-212ENST00000480614 ACAT1P24752 427 aaKnown RBP9.64□□□□□ -0.87
VEGFA-212ENST00000480614 ACTR3P61158 418 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 TNK2Q07912 1038 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 RALGDSQ12967 914 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 MFSD10Q14728 455 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 PFKFB4Q16877 469 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 DDI2Q5TDH0 399 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 SNX32Q86XE0 403 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 DPF3Q92784 378 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 TMEM138Q9NPI0 162 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 ABCC13Q9NSE7 274 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 GMIPQ9P107 970 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 SLC27A6Q9Y2P4 619 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 C1orf167Q5SNV9 1468 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 FAM46CQ5VWP2 391 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 TXNDC11Q6PKC3 985 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 HJURPQ8NCD3 748 aaPredicted RBP9.63□□□□□ -0.87
VEGFA-212ENST00000480614 STX16-NPEPL1H3BU86 382 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 STX16O14662 325 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 LTFP02788 710 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 LYNP07948 512 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 YBX3P16989 372 aaKnown RBP eCLIP9.63□□□□□ -0.872e-6■■□□□ 13.8
VEGFA-212ENST00000480614 ATP5F1P24539 256 aaPredicted RBP9.63□□□□□ -0.87
VEGFA-212ENST00000480614 PGM2Q96G03 612 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 C1QTNF1Q9BXJ1 281 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 CCDC177Q9NQR7 707 aaPredicted RBP9.63□□□□□ -0.87
VEGFA-212ENST00000480614 MSRAQ9UJ68 235 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 CHD2O14647 1828 aaKnown RBP9.63□□□□□ -0.87
VEGFA-212ENST00000480614 CABYRO75952 493 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 CLK2P49760 499 aaKnown RBP9.63□□□□□ -0.87
VEGFA-212ENST00000480614 EN1Q05925 392 aaPredicted RBP9.63□□□□□ -0.87
VEGFA-212ENST00000480614 QPRTQ15274 297 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 BHLHE22Q8NFJ8 381 aaPredicted RBP9.63□□□□□ -0.87
VEGFA-212ENST00000480614 FTHL17Q9BXU8 183 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 CORO1CQ9ULV4 474 aaPredicted RBP9.63□□□□□ -0.87
VEGFA-212ENST00000480614 POMCP01189 267 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 KELP23276 732 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 FMO4P31512 558 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 STARP49675 285 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 RDH11Q8TC12 318 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 BTBD9Q96Q07 612 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 MCIDASD6RGH6 385 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 CXCL11O14625 94 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 CBX5P45973 191 aa9.63□□□□□ -0.87
VEGFA-212ENST00000480614 BTG3Q14201 252 aaPredicted RBP9.63□□□□□ -0.87
VEGFA-212ENST00000480614 LPIN1Q14693 890 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms