RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 PIGZQ86VD9 579 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 GKN2Q86XP6 184 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 FAM129CQ86XR2 697 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 HID1Q8IV36 788 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 UNC45BQ8IWX7 931 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 FEM1CQ96JP0 617 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 RANBP9Q96S59 729 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 HDAC8Q9BY41 377 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 EDEM3Q9BZQ6 932 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 OCIAD1Q9NX40 245 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 LRIT1Q9P2V4 623 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 PCDHB3Q9Y5E6 796 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 NSD1Q96L73 2696 aaPredicted RBP12.11□□□□□ -0.47
USP11-208ENST00000480104 IGLON5A6NGN9 336 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 ZG16O60844 167 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 VNN1O95497 513 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 SNRPB2P08579 225 aaKnown RBP12.11□□□□□ -0.47
USP11-208ENST00000480104 P4HA1P13674 534 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 CTSEP14091 401 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 CHRNA3P32297 505 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 CSTF2P33240 577 aaKnown RBP eCLIP12.11□□□□□ -0.47
USP11-208ENST00000480104 IGFALSP35858 605 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 CASP4P49662 377 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 VASPP50552 380 aaPredicted RBP12.11□□□□□ -0.47
USP11-208ENST00000480104 HK3P52790 923 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 RAB15P59190 212 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 B4GALNT1Q00973 533 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 ANKRD1Q15327 319 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 EDRF1Q3B7T1 1238 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 BSPRYQ5W0U4 402 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 PM20D1Q6GTS8 502 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 ZNF438Q7Z4V0 828 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 CDH24Q86UP0 819 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 DENND6BQ8NEG7 585 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 GRIN3AQ8TCU5 1115 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 KCTD13Q8WZ19 329 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 DNAJC19Q96DA6 116 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 RTP4Q96DX8 246 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 DDX50Q9BQ39 737 aaKnown RBP12.11□□□□□ -0.47
USP11-208ENST00000480104 C1QTNF2Q9BXJ5 285 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 MRPL40Q9NQ50 206 aaKnown RBP12.11□□□□□ -0.47
USP11-208ENST00000480104 SLC25A13Q9UJS0 675 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 FADS3Q9Y5Q0 445 aa12.11□□□□□ -0.47
USP11-208ENST00000480104 FBN1P35555 2871 aaKnown RBP12.11□□□□□ -0.47
USP11-208ENST00000480104 CDC14CA4D256 554 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 B4E171 279 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 B4GAT1O43505 415 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 PPP6R2O75170 966 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 STK17BO94768 372 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 IDEP14735 1019 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 ITGA3P26006 1051 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 CLCN1P35523 988 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 TSPAN7P41732 249 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 PER3P56645 1201 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 OR1D5P58170 312 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 INCA1Q0VD86 236 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 ELOAQ14241 798 aaKnown RBP12.1□□□□□ -0.47
USP11-208ENST00000480104 HLTFQ14527 1009 aaKnown RBP eCLIP12.1□□□□□ -0.47
USP11-208ENST00000480104 ALG11Q2TAA5 492 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 C14orf28Q4W4Y0 310 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 SPOPLQ6IQ16 392 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 APLFQ8IW19 511 aaPredicted RBP12.1□□□□□ -0.47
USP11-208ENST00000480104 CHST14Q8NCH0 376 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 TMIEQ8NEW7 156 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 RNF34Q969K3 372 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 TSACCQ96A04 125 aaPredicted RBP12.1□□□□□ -0.47
USP11-208ENST00000480104 SNRNP40Q96DI7 357 aaKnown RBP12.1□□□□□ -0.47
USP11-208ENST00000480104 AK8Q96MA6 479 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 TEFMQ96QE5 360 aaKnown RBP12.1□□□□□ -0.47
USP11-208ENST00000480104 CTRCQ99895 268 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 SLC25A23Q9BV35 468 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 NT5C1AQ9BXI3 368 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 TRIM8Q9BZR9 551 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 ASF1BQ9NVP2 202 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 RPS6KL1Q9Y6S9 549 aa12.1□□□□□ -0.47
USP11-208ENST00000480104 MN1Q10571 1320 aaPredicted RBP12.1□□□□□ -0.47
USP11-208ENST00000480104 A6NCN8 305 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 YJEFN3A6XGL0 299 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 B4DGG1 531 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 E7ENQ6 273 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 LRRTM2O43300 516 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 NUDT21O43809 227 aaKnown RBP12.09□□□□□ -0.47
USP11-208ENST00000480104 LRCH4O75427 683 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 PRNPP04156 253 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 ADRB3P13945 408 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 MPSTP25325 297 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 EIF4A3P38919 411 aaKnown RBP12.09□□□□□ -0.47
USP11-208ENST00000480104 BLKP51451 505 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 CYP2J2P51589 502 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 NEK3P51956 506 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 LIMK2P53671 638 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 HDAC4P56524 1084 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 TBX4P57082 545 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 TRA2AQ13595 282 aaKnown RBP eCLIP12.09□□□□□ -0.47
USP11-208ENST00000480104 SLC12A1Q13621 1099 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 CPZQ66K79 652 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 SLC6A19Q695T7 634 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 MSANTD2Q6P1R3 559 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 NYAP1Q6ZVC0 841 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 RD3Q7Z3Z2 195 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms