RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 TMEM259Q4ZIN3 620 aa15.31■□□□□ 0.04
PRKN-207ENST00000479615 HS1BP3Q53T59 392 aa15.31■□□□□ 0.04
PRKN-207ENST00000479615 CCNI2Q6ZMN8 369 aaPredicted RBP15.31■□□□□ 0.04
PRKN-207ENST00000479615 TMPRSS7Q7RTY8 843 aa15.31■□□□□ 0.04
PRKN-207ENST00000479615 VPS36Q86VN1 386 aa15.31■□□□□ 0.04
PRKN-207ENST00000479615 ZNF354CQ86Y25 554 aa15.31■□□□□ 0.04
PRKN-207ENST00000479615 RYBPQ8N488 228 aaPredicted RBP15.31■□□□□ 0.04
PRKN-207ENST00000479615 HCAR2Q8TDS4 363 aa15.31■□□□□ 0.04
PRKN-207ENST00000479615 SYN2Q92777 582 aaPredicted RBP15.31■□□□□ 0.04
PRKN-207ENST00000479615 GDAP1L1Q96MZ0 367 aa15.31■□□□□ 0.04
PRKN-207ENST00000479615 LENG8Q96PV6 779 aaPredicted RBP15.31■□□□□ 0.04
PRKN-207ENST00000479615 FUCA2Q9BTY2 467 aa15.31■□□□□ 0.04
PRKN-207ENST00000479615 SLC17A9Q9BYT1 436 aa15.31■□□□□ 0.04
PRKN-207ENST00000479615 ZDHHC6Q9H6R6 413 aa15.31■□□□□ 0.04
PRKN-207ENST00000479615 KLHL11Q9NVR0 708 aa15.31■□□□□ 0.04
PRKN-207ENST00000479615 TOR4AQ9NXH8 423 aa15.31■□□□□ 0.04
PRKN-207ENST00000479615 MFHAS1Q9Y4C4 1052 aa15.31■□□□□ 0.04
PRKN-207ENST00000479615 FADS3Q9Y5Q0 445 aa15.31■□□□□ 0.04
PRKN-207ENST00000479615 A0A1W2PQJ5 194 aa15.3■□□□□ 0.04
PRKN-207ENST00000479615 TMEM191CA6NGB0 347 aa15.3■□□□□ 0.04
PRKN-207ENST00000479615 SLC31A1O15431 190 aa15.3■□□□□ 0.04
PRKN-207ENST00000479615 CREB3O43889 395 aa15.3■□□□□ 0.04
PRKN-207ENST00000479615 IGSF6O95976 241 aa15.3■□□□□ 0.04
PRKN-207ENST00000479615 FTLP02792 175 aaPredicted RBP15.3■□□□□ 0.04
PRKN-207ENST00000479615 TPI1P60174 286 aa15.3■□□□□ 0.04
PRKN-207ENST00000479615 SGCGQ13326 291 aa15.3■□□□□ 0.04
PRKN-207ENST00000479615 SHBQ15464 509 aa15.3■□□□□ 0.04
PRKN-207ENST00000479615 ERMARDQ5T6L9 678 aa15.3■□□□□ 0.04
PRKN-207ENST00000479615 PNPLA1Q8N8W4 532 aa15.3■□□□□ 0.04
PRKN-207ENST00000479615 NAP1L5Q96NT1 182 aaPredicted RBP15.3■□□□□ 0.04
PRKN-207ENST00000479615 TM6SF2Q9BZW4 377 aa15.3■□□□□ 0.04
PRKN-207ENST00000479615 TTYH3Q9C0H2 523 aa15.3■□□□□ 0.04
PRKN-207ENST00000479615 ZMIZ1Q9ULJ6 1067 aa15.3■□□□□ 0.04
PRKN-207ENST00000479615 MAP1BP46821 2468 aaKnown RBP15.29■□□□□ 0.04
PRKN-207ENST00000479615 DOCK4Q8N1I0 1966 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 C16orf96A6NNT2 1141 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 A6NNZ2 444 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 TMCO5BA8MYB1 307 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 RASA4BC9J798 803 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 GOLGA6L19H0YKK7 550 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 KRIT1O00522 736 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 NEMP1O14524 444 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 ENC1O14682 589 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 RIOK3O14730 519 aaKnown RBP15.29■□□□□ 0.04
PRKN-207ENST00000479615 RASA4O43374 803 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 PRPSAP2O60256 369 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 THEGLP0DJG4 465 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 HCAR3P49019 387 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 RHOAP61586 193 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 IL9RQ01113 521 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 SERINC3Q13530 473 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 SMAD1Q15797 465 aaKnown RBP15.29■□□□□ 0.04
PRKN-207ENST00000479615 PRAMEF14Q5SWL7 426 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 ZNF571Q7Z3V5 609 aaPredicted RBP15.29■□□□□ 0.04
PRKN-207ENST00000479615 ABI3BPQ7Z7G0 1075 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 TMPRSS12Q86WS5 348 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 SPATS2Q86XZ4 545 aaKnown RBP15.29■□□□□ 0.04
PRKN-207ENST00000479615 PYROXD2Q8N2H3 581 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 DENND6BQ8NEG7 585 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 CNDP2Q96KP4 475 aaKnown RBP15.29■□□□□ 0.04
PRKN-207ENST00000479615 C1QTNF7Q9BXJ2 289 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 CPEB1Q9BZB8 566 aaKnown RBP15.29■□□□□ 0.04
PRKN-207ENST00000479615 TAS2R14Q9NYV8 317 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 DKK3Q9UBP4 350 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 CNOT8Q9UFF9 292 aaKnown RBP15.29■□□□□ 0.04
PRKN-207ENST00000479615 AP4E1Q9UPM8 1137 aa15.29■□□□□ 0.04
PRKN-207ENST00000479615 NEMP2A6NFY4 417 aa15.28■□□□□ 0.04
PRKN-207ENST00000479615 EEF2KO00418 725 aaKnown RBP15.28■□□□□ 0.04
PRKN-207ENST00000479615 TOR1BO14657 336 aa15.28■□□□□ 0.04
PRKN-207ENST00000479615 DAPK3O43293 454 aa15.28■□□□□ 0.04
PRKN-207ENST00000479615 TMCC1O94876 653 aa15.28■□□□□ 0.04
PRKN-207ENST00000479615 TPM3P06753 285 aa15.28■□□□□ 0.04
PRKN-207ENST00000479615 PCK1P35558 622 aa15.28■□□□□ 0.04
PRKN-207ENST00000479615 RABIFP47224 123 aa15.28■□□□□ 0.04
PRKN-207ENST00000479615 GDPD4Q6W3E5 623 aa15.28■□□□□ 0.04
PRKN-207ENST00000479615 KYAT3Q6YP21 454 aaKnown RBP15.28■□□□□ 0.04
PRKN-207ENST00000479615 PARS2Q7L3T8 475 aaKnown RBP15.28■□□□□ 0.04
PRKN-207ENST00000479615 GATAD2AQ86YP4 633 aa15.28■□□□□ 0.04
PRKN-207ENST00000479615 LZTR1Q8N653 840 aa15.28■□□□□ 0.04
PRKN-207ENST00000479615 ZCCHC14Q8WYQ9 949 aaKnown RBP15.28■□□□□ 0.04
PRKN-207ENST00000479615 C1QTNF2Q9BXJ5 285 aa15.28■□□□□ 0.04
PRKN-207ENST00000479615 MAGEB5Q9BZ81 275 aa15.28■□□□□ 0.04
PRKN-207ENST00000479615 ISCUQ9H1K1 167 aa15.28■□□□□ 0.04
PRKN-207ENST00000479615 NOL6Q9H6R4 1146 aaKnown RBP15.28■□□□□ 0.04
PRKN-207ENST00000479615 ZFR2Q9UPR6 939 aaKnown RBP15.28■□□□□ 0.04
PRKN-207ENST00000479615 SYCE3A1L190 88 aa15.27■□□□□ 0.04
PRKN-207ENST00000479615 ARHGAP42A6NI28 874 aa15.27■□□□□ 0.04
PRKN-207ENST00000479615 DDX3XO00571 662 aaKnown RBP eCLIP15.27■□□□□ 0.044e-14■■■■□ 23.3
PRKN-207ENST00000479615 FPGTO14772 594 aa15.27■□□□□ 0.04
PRKN-207ENST00000479615 RFPL3O75679 317 aa15.27■□□□□ 0.04
PRKN-207ENST00000479615 PRLRP16471 622 aa15.27■□□□□ 0.04
PRKN-207ENST00000479615 CKMT2P17540 419 aa15.27■□□□□ 0.04
PRKN-207ENST00000479615 HNF1BP35680 557 aa15.27■□□□□ 0.04
PRKN-207ENST00000479615 UBASH3AP57075 661 aa15.27■□□□□ 0.04
PRKN-207ENST00000479615 ZBED6P86452 979 aa15.27■□□□□ 0.04
PRKN-207ENST00000479615 FANCCQ00597 558 aa15.27■□□□□ 0.04
PRKN-207ENST00000479615 OGDHQ02218 1023 aa15.27■□□□□ 0.04
PRKN-207ENST00000479615 ZNF211Q13398 564 aaPredicted RBP15.27■□□□□ 0.04
PRKN-207ENST00000479615 RFTN1Q14699 578 aaPredicted RBP15.27■□□□□ 0.04
PRKN-207ENST00000479615 BOLA3Q53S33 107 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms