RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 DCAF12L1Q5VU92 463 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 KIAA0895LQ68EN5 471 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 ERN2Q76MJ5 926 aaKnown RBP15.71■□□□□ 0.11
C9orf3-217ENST00000479161 CPNE8Q86YQ8 564 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 CHST14Q8NCH0 376 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 GANCQ8TET4 914 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 RAPGEF5Q92565 580 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 PIGKQ92643 395 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 ZNF641Q96N77 438 aaPredicted RBP15.71■□□□□ 0.11
C9orf3-217ENST00000479161 TUBGCP5Q96RT8 1024 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 GRPEL1Q9HAV7 217 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 SP110Q9HB58 689 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 DYRK4Q9NR20 520 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 LHX3Q9UBR4 397 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 DMXL1Q9Y485 3027 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 A0A1B0GTW7 788 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 PALMO75781 387 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 PEX11BO96011 259 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 CD27P26842 260 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 RHOAP61586 193 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 CNTN1Q12860 1018 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 MMRN1Q13201 1228 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 HNRNPDQ14103 355 aaKnown RBP15.7■□□□□ 0.1
C9orf3-217ENST00000479161 ZNF805Q5CZA5 627 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 PIP5KL1Q5T9C9 394 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 NCBP2-AS2Q69YL0 99 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 SLC9A4Q6AI14 798 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 ZNF662Q6ZS27 426 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 FAM124AQ86V42 546 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 TRIM69Q86WT6 500 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 CACUL1Q86Y37 369 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 KATNAL2Q8IYT4 538 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 RNF10Q8N5U6 811 aaKnown RBP15.7■□□□□ 0.1
C9orf3-217ENST00000479161 TEX26Q8N6G2 289 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 PQLC3Q8N755 202 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 BIRC7Q96CA5 298 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 TM6SF2Q9BZW4 377 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 ZDHHC5Q9C0B5 715 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 LACRTQ9GZZ8 138 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 BRD8Q9H0E9 1235 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 C6orf106Q9H6K1 298 aaPredicted RBP15.7■□□□□ 0.1
C9orf3-217ENST00000479161 CAPN10Q9HC96 672 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 TMEM74BQ9NUR3 256 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 SEPT3Q9UH03 358 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 SALL4Q9UJQ4 1053 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 SLC6A14Q9UN76 642 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 EFR3BQ9Y2G0 817 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 ACTL7AQ9Y615 435 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 CABIN1Q9Y6J0 2220 aa15.7■□□□□ 0.1
C9orf3-217ENST00000479161 ANKRD36A6QL64 1941 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 LRRD1A4D1F6 860 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 TMEM110-MUSTN1A8MSY1 372 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 MEI4A8MW99 385 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 DFFAO00273 331 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 KPNA3O00505 521 aaPredicted RBP15.69■□□□□ 0.1
C9orf3-217ENST00000479161 IGHV4-34P06331 123 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 CCNCP24863 283 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 GARSP41250 739 aaKnown RBP15.69■□□□□ 0.1
C9orf3-217ENST00000479161 DNA2P51530 1060 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 NEK3P51956 506 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 COPS2P61201 443 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 TIGD7Q6NT04 549 aaPredicted RBP15.69■□□□□ 0.1
C9orf3-217ENST00000479161 NCEH1Q6PIU2 408 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.69■□□□□ 0.1
C9orf3-217ENST00000479161 BZW1Q7L1Q6 419 aaKnown RBP15.69■□□□□ 0.1
C9orf3-217ENST00000479161 KIAA1328Q86T90 577 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 LRRC8AQ8IWT6 810 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 RCOR2Q8IZ40 523 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 BBS5Q8N3I7 341 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 ATPAF2Q8N5M1 289 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 C12orf50Q8NA57 414 aaPredicted RBP15.69■□□□□ 0.1
C9orf3-217ENST00000479161 OR14C36Q8NHC7 312 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 EXD1Q8NHP7 514 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 KIAA1524Q8TCG1 905 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 NSMCE1Q8WV22 266 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 HDAC11Q96DB2 347 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 ORAI3Q9BRQ5 295 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 NUSAP1Q9BXS6 441 aaKnown RBP15.69■□□□□ 0.1
C9orf3-217ENST00000479161 HAUS2Q9NVX0 235 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 DMTF1Q9Y222 760 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 PCDH15Q96QU1 1955 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 DOCK9Q9BZ29 2069 aa15.69■□□□□ 0.1
C9orf3-217ENST00000479161 A0A1W2PPC4 97 aa15.68■□□□□ 0.1
C9orf3-217ENST00000479161 A0A1W2PQ67 120 aa15.68■□□□□ 0.1
C9orf3-217ENST00000479161 TSPAN11A1L157 253 aa15.68■□□□□ 0.1
C9orf3-217ENST00000479161 CCDC66A2RUB6 948 aa15.68■□□□□ 0.1
C9orf3-217ENST00000479161 GOLGA6L3A6NEY3 463 aa15.68■□□□□ 0.1
C9orf3-217ENST00000479161 BCAT2O15382 392 aaPredicted RBP15.68■□□□□ 0.1
C9orf3-217ENST00000479161 BNIP3LO60238 219 aa15.68■□□□□ 0.1
C9orf3-217ENST00000479161 RNGTTO60942 597 aaKnown RBP15.68■□□□□ 0.1
C9orf3-217ENST00000479161 ZRANB2O95218 330 aaKnown RBP eCLIP15.68■□□□□ 0.1
C9orf3-217ENST00000479161 CES1P23141 567 aa15.68■□□□□ 0.1
C9orf3-217ENST00000479161 CTNNA1P35221 906 aaKnown RBP15.68■□□□□ 0.1
C9orf3-217ENST00000479161 NR2C2P49116 596 aa15.68■□□□□ 0.1
C9orf3-217ENST00000479161 TAS2R38P59533 333 aa15.68■□□□□ 0.1
C9orf3-217ENST00000479161 AP1S1P61966 158 aa15.68■□□□□ 0.1
C9orf3-217ENST00000479161 TFDP2Q14188 446 aa15.68■□□□□ 0.1
C9orf3-217ENST00000479161 LBRQ14739 615 aaKnown RBP15.68■□□□□ 0.1
C9orf3-217ENST00000479161 ODF2Q5BJF6 829 aa15.68■□□□□ 0.1
C9orf3-217ENST00000479161 GDPD4Q6W3E5 623 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms