RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 JADE1Q6IE81 842 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 MOB3CQ70IA8 216 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 TICAM1Q8IUC6 712 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 TMEM217Q8N7C4 229 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 CAGE1Q8TC20 777 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 FAR1Q8WVX9 515 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 NELL1Q92832 810 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 GTF3C6Q969F1 213 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 JAKMIP2Q96AA8 810 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 MMABQ96EY8 250 aaPredicted RBP5.43□□□□□ -1.54
UPF3B-203ENST00000478840 RADILQ96JH8 1075 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 ZMAT2Q96NC0 199 aaKnown RBP5.43□□□□□ -1.54
UPF3B-203ENST00000478840 TM2D2Q9BX73 214 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 TEX12Q9BXU0 123 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 IKZF4Q9H2S9 585 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 CXorf56Q9H5V9 222 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 PDE7BQ9NP56 450 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 ZCCHC17Q9NP64 241 aaKnown RBP5.43□□□□□ -1.54
UPF3B-203ENST00000478840 MLXIPLQ9NP71 852 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 ASAH2Q9NR71 780 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 MTMR6Q9Y217 621 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 ZNF711Q9Y462 761 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 AOX1Q06278 1338 aa5.43□□□□□ -1.54
UPF3B-203ENST00000478840 EIF3CLB5ME19 914 aaKnown RBP5.42□□□□□ -1.54
UPF3B-203ENST00000478840 TARM1B6A8C7 271 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 USP17L23D6RBM5 183 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 EBAG9O00559 213 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 TP73O15350 636 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 HNRNPCL1O60812 293 aaKnown RBP5.42□□□□□ -1.54
UPF3B-203ENST00000478840 IPO7O95373 1038 aaKnown RBP5.42□□□□□ -1.54
UPF3B-203ENST00000478840 IL1AP01583 271 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 RPN1P04843 607 aaKnown RBP5.42□□□□□ -1.54
UPF3B-203ENST00000478840 LCKP06239 509 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 PTPN2P17706 415 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 TACR3P29371 465 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 CHRNA5P30532 468 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 GCH1P30793 250 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 HOXA7P31268 230 aaPredicted RBP5.42□□□□□ -1.54
UPF3B-203ENST00000478840 HOXA13P31271 388 aaPredicted RBP5.42□□□□□ -1.54
UPF3B-203ENST00000478840 CDAP32320 146 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 PIP4K2AP48426 406 aaPredicted RBP5.42□□□□□ -1.54
UPF3B-203ENST00000478840 CENPAP49450 140 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 GNAQP50148 359 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 PSMD6Q15008 389 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 RASA2Q15283 850 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 ME3Q16798 604 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 WDR5BQ86VZ2 330 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 VRK3Q8IV63 474 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 SCML4Q8N228 414 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 OR4N2Q8NGD1 307 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 GDPD5Q8WTR4 605 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 KAT2BQ92831 832 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 RITA1Q96K30 269 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 C1orf74Q96LT6 269 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 TOR3AQ9H497 397 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 MMRN2Q9H8L6 949 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 DLGAP2Q9P1A6 1054 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 ADAM21Q9UKJ8 722 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 SESN1Q9Y6P5 492 aa5.42□□□□□ -1.54
UPF3B-203ENST00000478840 FAM90A8PA6NJQ4 464 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 FAM157AC9JC47 383 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 MGST3O14880 152 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 MSI1O43347 362 aaKnown RBP5.41□□□□□ -1.54
UPF3B-203ENST00000478840 FOXD2O60548 495 aaPredicted RBP5.41□□□□□ -1.54
UPF3B-203ENST00000478840 ENTPD3O75355 529 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 PLAUP00749 431 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 CLTBP09497 229 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 FAM90A13PP0C7W8 464 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 FAM90A24PP0C7X0 464 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 GABRB1P18505 474 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 TNFRSF1AP19438 455 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 PTGER1P34995 402 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 DPP6P42658 865 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 HSD17B4P51659 736 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 CTSWP56202 376 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 SLC18A2Q05940 514 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 MTA1Q13330 715 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 FRG1Q14331 258 aaKnown RBP5.41□□□□□ -1.54
UPF3B-203ENST00000478840 SHBQ15464 509 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 ALG11Q2TAA5 492 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 GKAP1Q5VSY0 366 aaPredicted RBP5.41□□□□□ -1.54
UPF3B-203ENST00000478840 GARNL3Q5VVW2 1013 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 HMBOX1Q6NT76 420 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 GSTA5Q7RTV2 222 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 GPAT4Q86UL3 456 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 BCAS4Q8TDM0 211 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 SGCDQ92629 289 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 PIGKQ92643 395 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 UROC1Q96N76 676 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 HIPK3Q9H422 1215 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 GIMAP4Q9NUV9 329 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 MARCH4Q9P2E8 410 aaPredicted RBP5.41□□□□□ -1.54
UPF3B-203ENST00000478840 SLC17A6Q9P2U8 582 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 UTYO14607 1347 aa5.41□□□□□ -1.54
UPF3B-203ENST00000478840 A0A0A0MQY5 61 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 CXorf65A6NEN9 183 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 NPIPB11E5RHQ5 1161 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 UBE2CO00762 179 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 ADAM20O43506 726 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 NARSO43776 548 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms