RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 PEX26Q7Z412 305 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 METTL3Q86U44 580 aaKnown RBP7□□□□□ -1.29
BRCA1-215ENST00000478531 KATNAL2Q8IYT4 538 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 PLD5Q8N7P1 536 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 LRRC57Q8N9N7 239 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 OR14C36Q8NHC7 312 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 RUBCNQ92622 972 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 PIGKQ92643 395 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 ISG20Q96AZ6 181 aaKnown RBP7□□□□□ -1.29
BRCA1-215ENST00000478531 ZC3H10Q96K80 434 aaKnown RBP7□□□□□ -1.29
BRCA1-215ENST00000478531 CALR3Q96L12 384 aaKnown RBP7□□□□□ -1.29
BRCA1-215ENST00000478531 ZNF830Q96NB3 372 aaPredicted RBP7□□□□□ -1.29
BRCA1-215ENST00000478531 RNF157Q96PX1 679 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 HEPHQ9BQS7 1158 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 NEUROG2Q9H2A3 272 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 ARRDC1-AS1Q9H2J1 176 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 C6orf106Q9H6K1 298 aaPredicted RBP7□□□□□ -1.29
BRCA1-215ENST00000478531 LHX3Q9UBR4 397 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 EVLQ9UI08 416 aaPredicted RBP7□□□□□ -1.29
BRCA1-215ENST00000478531 PPM1HQ9ULR3 514 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 SCML1Q9UN30 329 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 TTLL3Q9Y4R7 772 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 WASF2Q9Y6W5 498 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 LRRK1Q38SD2 2015 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 INSIG1O15503 277 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 MAFKO60675 156 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 GJB3O75712 270 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 NEBLO76041 1014 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 FSBPO95073 299 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 EPN2O95208 641 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 PIGNO95427 931 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 IGLV3-19P01714 112 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 RETP07949 1114 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 KRT10P13645 584 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 CTNNA1P35221 906 aaKnown RBP7□□□□□ -1.29
BRCA1-215ENST00000478531 MPLP40238 635 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 GARSP41250 739 aaKnown RBP7□□□□□ -1.29
BRCA1-215ENST00000478531 CDKN2BP42772 138 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 ADPRHP54922 357 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 ZNF33AQ06730 810 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 SFSWAPQ12872 951 aaKnown RBP7□□□□□ -1.29
BRCA1-215ENST00000478531 LBRQ14739 615 aaKnown RBP7□□□□□ -1.29
BRCA1-215ENST00000478531 PAFAH1B3Q15102 231 aaKnown RBP7□□□□□ -1.29
BRCA1-215ENST00000478531 CYTH1Q15438 398 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 INO80DQ53TQ3 878 aaPredicted RBP7□□□□□ -1.29
BRCA1-215ENST00000478531 LRRC73Q5JTD7 316 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 TMCO4Q5TGY1 634 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 DCAF12L1Q5VU92 463 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 NCEH1Q6PIU2 408 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 SPOCD1Q6ZMY3 1216 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 USP30Q70CQ3 517 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 SLC41A1Q8IVJ1 513 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 RGL4Q8IZJ4 473 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 SYCE1Q8N0S2 351 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7□□□□□ -1.29
BRCA1-215ENST00000478531 PAF1Q8N7H5 531 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 TSEN2Q8NCE0 465 aaKnown RBP7□□□□□ -1.29
BRCA1-215ENST00000478531 CCNYQ8ND76 341 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 TMIEQ8NEW7 156 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 NSMCE1Q8WV22 266 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 CASKIN2Q8WXE0 1202 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 ARRDC3Q96B67 414 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 HAUS1Q96CS2 278 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 PPP1R16AQ96I34 528 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 RBM41Q96IZ5 413 aaKnown RBP7□□□□□ -1.29
BRCA1-215ENST00000478531 MIR1-1HGQ9H1L0 117 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 DTLQ9NZJ0 730 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 AMFRQ9UKV5 643 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 SPEGQ15772 3267 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 TMEM131Q92545 1883 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 TBC1D3DA0A087WVF3 549 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 TBC1D3IA0A087WXS9 549 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 TBC1D3EA0A087X179 549 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 TBC1D3KA0A087X1G2 549 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 CXorf51AA0A1B0GTR3 108 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 TTC24A2A3L6 582 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 TBC1D3FA6NER0 549 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 LRRC72A6NJI9 287 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 ZNF487B1APH4 448 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 TBC1D3LB9A6J9 549 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 CST8O60676 142 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 ZRANB2O95218 330 aaKnown RBP eCLIP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 TBC1D3HP0C7X1 549 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 MAOBP27338 520 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 RGRP47804 291 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 SCNN1BP51168 640 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 MAXP61244 160 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 RAD51Q06609 339 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 SLC10A7Q0GE19 358 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 GALNT2Q10471 571 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 AP1B1Q10567 949 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 SLC10A2Q12908 348 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 MYLK3Q32MK0 819 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 TFDP3Q5H9I0 405 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 CCDC181Q5TID7 509 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 AGBL4Q5VU57 503 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 SLC9A4Q6AI14 798 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 TBC1D3GQ6DHY5 549 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 TBC1D3CQ6IPX1 549 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 TCEAL6Q6IPX3 200 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms