RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 SLC35F5Q8WV83 523 aa4.17□□□□□ -1.74
SMARCA1-204ENST00000478420 APOPT1Q96IL0 206 aa4.17□□□□□ -1.74
SMARCA1-204ENST00000478420 FUZQ9BT04 418 aa4.17□□□□□ -1.74
SMARCA1-204ENST00000478420 POLDIP3Q9BY77 421 aaKnown RBP4.17□□□□□ -1.74
SMARCA1-204ENST00000478420 RBM38Q9H0Z9 239 aaKnown RBP4.17□□□□□ -1.74
SMARCA1-204ENST00000478420 KRCC1Q9NPI7 259 aaPredicted RBP4.17□□□□□ -1.74
SMARCA1-204ENST00000478420 HCN3Q9P1Z3 774 aa4.17□□□□□ -1.74
SMARCA1-204ENST00000478420 FBXO9Q9UK97 447 aaPredicted RBP4.17□□□□□ -1.74
SMARCA1-204ENST00000478420 CACNA1IQ9P0X4 2223 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 RPS10-NUDT3A0A1W2PQS6 291 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 GAGE10A6NGK3 116 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 A6NLC8 198 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 TNPO2O14787 897 aaKnown RBP4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 TSPAN4O14817 238 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 SLC25A17O43808 307 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 TOMM40O96008 361 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 CYP1A2P05177 515 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 ARSBP15848 533 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 KCNJ4P48050 445 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 PPP3CCP48454 512 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 TUBP50607 506 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 SELENOVP59797 346 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 YWHAZP63104 245 aaKnown RBP4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 POU5F1BQ06416 359 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 GPR18Q14330 331 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 DUSP6Q16828 381 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 ODF3L2Q3SX64 289 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 ZNF766Q5HY98 468 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 INTS11Q5TA45 600 aaKnown RBP4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 DCAF12L2Q5VW00 463 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 AWAT2Q6E213 333 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 CCDC70Q6NSX1 233 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 C17orf99Q6UX52 265 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 FAM83HQ6ZRV2 1179 aaPredicted RBP4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 Q6ZTK2 550 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 CTU1Q7Z7A3 348 aaKnown RBP4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 PALB2Q86YC2 1186 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 TCP11L2Q8N4U5 519 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 NSMCE1Q8WV22 266 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 TMEM170AQ8WVE7 144 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 ST8SIA4Q92187 359 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 ZBTB10Q96DT7 871 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 RNF125Q96EQ8 232 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 GFM1Q96RP9 751 aaKnown RBP4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 NAP1L4Q99733 375 aaKnown RBP4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 LHPPQ9H008 270 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 TTYH1Q9H313 450 aaPredicted RBP4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 CATSPERBQ9H7T0 1116 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 WDR6Q9NNW5 1121 aaKnown RBP4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 PPP1R14DQ9NXH3 145 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 MAP3K20Q9NYL2 800 aaKnown RBP4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 NCKIPSDQ9NZQ3 722 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 PEMTQ9UBM1 199 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 ARHGAP26Q9UNA1 814 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 PCDHGB5Q9Y5G0 923 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 TNFRSF18Q9Y5U5 241 aa4.16□□□□□ -1.74
SMARCA1-204ENST00000478420 PABPN1LA6NDY0 278 aaKnown RBP4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 FAM90A10PA6NDY2 464 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 CD8B2A6NJW9 211 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 CLDN7O95471 211 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 URODP06132 367 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 HOXB2P14652 356 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 CTPS1P17812 591 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 CDC25AP30304 524 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 GGT5P36269 586 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 LIFRP42702 1097 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 PAFAH1B1P43034 410 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 CENPAP49450 140 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 POLGP54098 1239 aaPredicted RBP4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 ZP1P60852 638 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 EFNB1P98172 346 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 SLC18A2Q05940 514 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 LMOD3Q0VAK6 560 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 SLC9C2Q5TAH2 1124 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 OTUD1Q5VV17 481 aaPredicted RBP4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 MOB3CQ70IA8 216 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 RRM2BQ7LG56 351 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 TECPR1Q7Z6L1 1165 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 FAM160B2Q86V87 743 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 PAF1Q8N7H5 531 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 TSPYL6Q8N831 410 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 NAXEQ8NCW5 288 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 TMEM163Q8TC26 289 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 TBC1D22AQ8WUA7 517 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 RNF183Q96D59 192 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 SEC62Q99442 399 aaKnown RBP4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 PAIP1Q9H074 479 aaKnown RBP4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 VEZTQ9HBM0 779 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 UBN1Q9NPG3 1134 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 SPATS2LQ9NUQ6 558 aaKnown RBP4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 BABAM1Q9NWV8 329 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 SLC25A10Q9UBX3 287 aaPredicted RBP4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 SWAP70Q9UH65 585 aa4.15□□□□□ -1.75
SMARCA1-204ENST00000478420 MS4A18H0YCH9 400 aa4.14□□□□□ -1.75
SMARCA1-204ENST00000478420 EBAG9O00559 213 aa4.14□□□□□ -1.75
SMARCA1-204ENST00000478420 TNFRSF13BO14836 293 aaPredicted RBP4.14□□□□□ -1.75
SMARCA1-204ENST00000478420 OAZ2O95190 189 aa4.14□□□□□ -1.75
SMARCA1-204ENST00000478420 SLC2A4P14672 509 aa4.14□□□□□ -1.75
SMARCA1-204ENST00000478420 RFX2P48378 723 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms