RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 LRIG2O94898 1065 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 IGSF6O95976 241 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 HTR7P34969 479 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 COPB1P53618 953 aaKnown RBP14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 TARDBPQ13148 414 aaKnown RBP eCLIP14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 PTK2BQ14289 1009 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 CLEC16AQ2KHT3 1053 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 C15orf59Q2T9L4 293 aaPredicted RBP14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 COL28A1Q2UY09 1125 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 SEL1L3Q68CR1 1132 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 C19orf48Q6RUI8 117 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 GCNT7Q6ZNI0 430 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 Q6ZSR6 202 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 PARS2Q7L3T8 475 aaKnown RBP14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 NLRP14Q86W24 1093 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 PHF13Q86YI8 300 aaPredicted RBP14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 SLC30A5Q8TAD4 765 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 GPT2Q8TD30 523 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 ASB12Q8WXK4 309 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 CENPIQ92674 756 aaPredicted RBP14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 NAT10Q9H0A0 1025 aaKnown RBP14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 CATSPERBQ9H7T0 1116 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 FZD3Q9NPG1 666 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 FANCLQ9NW38 375 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 DNAJC28Q9NX36 388 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 DNAI1Q9UI46 699 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 CA5BQ9Y2D0 317 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 SIK3Q9Y2K2 1263 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 CACNA1GO43497 2377 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 TOR1BO14657 336 aa14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 FGF10O15520 208 aaPredicted RBP14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 FFAR2O15552 330 aa14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 BUB1O43683 1085 aa14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 GP1BAP07359 652 aa14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 CKMT1AP12532 417 aa14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 UNGP13051 313 aaPredicted RBP14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 XPAP23025 273 aaPredicted RBP14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 EPHB2P29323 1055 aa14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 SUOXP51687 545 aa14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 YBEYP58557 167 aaPredicted RBP14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 UBXN1Q04323 297 aa14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 GRM3Q14832 879 aa14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 RTP5Q14D33 572 aa14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 PARP15Q460N3 678 aa14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 DCUN1D2Q6PH85 259 aa14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 RBM43Q6ZSC3 357 aaKnown RBP14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 RTL3Q8N8U3 475 aaKnown RBP14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 BTN2A2Q8WVV5 523 aa14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 HNRNPLLQ8WVV9 542 aaKnown RBP14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 GLMNQ92990 594 aa14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 LENG8Q96PV6 779 aaPredicted RBP14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 ABCG4Q9H172 646 aa14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 LMBRD1Q9NUN5 540 aa14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 LIMA1Q9UHB6 759 aaKnown RBP14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 ZFR2Q9UPR6 939 aaKnown RBP14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 ASPMQ8IZT6 3477 aa14.68□□□□□ -0.06
SMARCE1-209ENST00000478349 SPTY2D1-AS1A0A0U1RR47 76 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 SIGLEC16A6NMB1 481 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 C16orf96A6NNT2 1141 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 EIF3CLB5ME19 914 aaKnown RBP14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 TRIM38O00635 465 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 SCAMP1O15126 338 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 KDELR3O43731 214 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 ZNF821O75541 412 aaPredicted RBP14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 MBD3O95983 291 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 UGT2B4P06133 528 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 NME1P15531 152 aaKnown RBP14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 FERP16591 822 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 CHRNB2P17787 502 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 RFC1P35251 1148 aaPredicted RBP14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 ACTN2P35609 894 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 ACVRL1P37023 503 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 KLK7P49862 253 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 ZNF143P52747 638 aaPredicted RBP14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 THOP1P52888 689 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 HDAC4P56524 1084 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 CLDN2P57739 230 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 RHOAP61586 193 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 MYLK3Q32MK0 819 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 INO80DQ53TQ3 878 aaPredicted RBP14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 CFAP58Q5T655 872 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 ZCCHC8Q6NZY4 707 aaKnown RBP14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 SCYL2Q6P3W7 929 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 DCBLD1Q8N8Z6 715 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 JOSD2Q8TAC2 188 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 DCBLD2Q96PD2 775 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 DEPDC7Q96QD5 511 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 ERGIC2Q96RQ1 377 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 EIF3CQ99613 913 aaKnown RBP14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 NCAPGQ9BPX3 1015 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 CNPY3Q9BT09 278 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 C1QTNF2Q9BXJ5 285 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 CSNK1G3Q9Y6M4 447 aa14.67□□□□□ -0.06
SMARCE1-209ENST00000478349 TMEM131Q92545 1883 aa14.66□□□□□ -0.06
SMARCE1-209ENST00000478349 PAK4O96013 591 aaPredicted RBP14.66□□□□□ -0.06
SMARCE1-209ENST00000478349 CSF2P04141 144 aa14.66□□□□□ -0.06
SMARCE1-209ENST00000478349 RPIAP49247 311 aa14.66□□□□□ -0.06
SMARCE1-209ENST00000478349 SEMG2Q02383 582 aa14.66□□□□□ -0.06
SMARCE1-209ENST00000478349 ELP6Q0PNE2 266 aa14.66□□□□□ -0.06
SMARCE1-209ENST00000478349 PDE1CQ14123 709 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms