RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 DRD3P35462 400 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 RGRP47804 291 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 SNRPD1P62314 119 aaKnown RBP10.43□□□□□ -0.74
HDAC6-222ENST00000478095 ZNF33AQ06730 810 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 IL10RBQ08334 325 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 GALNT2Q10471 571 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 CNTN1Q12860 1018 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 PAFAH1B3Q15102 231 aaKnown RBP10.43□□□□□ -0.74
HDAC6-222ENST00000478095 MYLK3Q32MK0 819 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 FAM46CQ5VWP2 391 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 LYSMD4Q5XG99 296 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 NPNTQ6UXI9 565 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-222ENST00000478095 SPOCD1Q6ZMY3 1216 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 USP30Q70CQ3 517 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 CYP2U1Q7Z449 544 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 SLC41A1Q8IVJ1 513 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 CCDC50Q8IVM0 306 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 KATNAL2Q8IYT4 538 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 PLD5Q8N7P1 536 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 TSEN2Q8NCE0 465 aaKnown RBP10.43□□□□□ -0.74
HDAC6-222ENST00000478095 CASKIN2Q8WXE0 1202 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 SNX19Q92543 992 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 RUBCNQ92622 972 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 ISG20Q96AZ6 181 aaKnown RBP10.43□□□□□ -0.74
HDAC6-222ENST00000478095 ARRDC3Q96B67 414 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 ZNF830Q96NB3 372 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-222ENST00000478095 HEPHQ9BQS7 1158 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 CINPQ9BW66 212 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-222ENST00000478095 MAK16Q9BXY0 300 aaKnown RBP10.43□□□□□ -0.74
HDAC6-222ENST00000478095 C6orf106Q9H6K1 298 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-222ENST00000478095 LZTFL1Q9NQ48 299 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 DTLQ9NZJ0 730 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 SCML1Q9UN30 329 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 HEY1Q9Y5J3 304 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 DMDP11532 3685 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 USP34Q70CQ2 3546 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 TTC24A2A3L6 582 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-222ENST00000478095 MEI4A8MW99 385 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 MUSKO15146 869 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 GJB3O75712 270 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 FSBPO95073 299 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 ZRANB2O95218 330 aaKnown RBP eCLIP10.42□□□□□ -0.74
HDAC6-222ENST00000478095 PIGNO95427 931 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 SEMA4FO95754 770 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 PEX11BO96011 259 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 UGT2B4P06133 528 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 ITPKAP23677 461 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 MAOBP27338 520 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 MPLP40238 635 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 GARSP41250 739 aaKnown RBP10.42□□□□□ -0.74
HDAC6-222ENST00000478095 CDKN2BP42772 138 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 ADPRHP54922 357 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 PRSS12P56730 875 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 ADCY2Q08462 1091 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 SLC10A7Q0GE19 358 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 SPEM2Q0P670 501 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 SLC10A2Q12908 348 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-222ENST00000478095 ZNF235Q14590 738 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 LBRQ14739 615 aaKnown RBP10.42□□□□□ -0.74
HDAC6-222ENST00000478095 IFI16Q16666 785 aaKnown RBP10.42□□□□□ -0.74
HDAC6-222ENST00000478095 FAM182AQ5T1J6 154 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 TMCO4Q5TGY1 634 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 AGBL4Q5VU57 503 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 SLC9A4Q6AI14 798 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 AADACL2Q6P093 401 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 NCEH1Q6PIU2 408 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 PEX26Q7Z412 305 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 NT5DC3Q86UY8 548 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 TMIEQ8NEW7 156 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 OR14C36Q8NHC7 312 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 PIGKQ92643 395 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 ALG3Q92685 438 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 VOPP1Q96AW1 172 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 HAUS1Q96CS2 278 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 RBM41Q96IZ5 413 aaKnown RBP10.42□□□□□ -0.74
HDAC6-222ENST00000478095 CALR3Q96L12 384 aaKnown RBP10.42□□□□□ -0.74
HDAC6-222ENST00000478095 TSGA10Q9BZW7 698 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 PARD6AQ9NPB6 346 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 DYRK4Q9NR20 520 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 SAE1Q9UBE0 346 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-222ENST00000478095 FZD4Q9ULV1 537 aa10.42□□□□□ -0.74
HDAC6-222ENST00000478095 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.42□□□□□ -0.74
HDAC6-222ENST00000478095 MYO18AQ92614 2054 aaKnown RBP10.42□□□□□ -0.74
HDAC6-222ENST00000478095 hCG_1818297A0A087WSY0 165 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 BCLAF3A2AJT9 711 aaKnown RBP10.41□□□□□ -0.74
HDAC6-222ENST00000478095 CCDC66A2RUB6 948 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 ZNF487B1APH4 448 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 KRT86O43790 486 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 CST8O60676 142 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 POP4O95707 220 aaKnown RBP10.41□□□□□ -0.74
HDAC6-222ENST00000478095 PECAM1P16284 738 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-222ENST00000478095 CTNNA2P26232 953 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 MAXP61244 160 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 SFSWAPQ12872 951 aaKnown RBP10.41□□□□□ -0.74
HDAC6-222ENST00000478095 RFTN1Q14699 578 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-222ENST00000478095 TFDP3Q5H9I0 405 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 LRRC73Q5JTD7 316 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 DCAF12L1Q5VU92 463 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 TCEAL6Q6IPX3 200 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms