RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 ACADMP11310 421 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 CYP19A1P11511 503 aaPredicted RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 MYL4P12829 197 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 OSMP13725 252 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 ANPEPP15144 967 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 GYPEP15421 78 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 AGXTP21549 392 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 IL32P24001 234 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 CTSSP25774 331 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 PEX2P28328 305 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 MAPK4P31152 587 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 TLX1P31314 330 aaPredicted RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 AKT1P31749 480 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 ACSL1P33121 698 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 SELENOPP49908 381 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 AGFG1P52594 562 aaKnown RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 HSPA2P54652 639 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 POLE2P56282 527 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 VBP1P61758 197 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 TSPAN5P62079 268 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 MRPS5P82675 430 aaKnown RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 OTUD4Q01804 1114 aaKnown RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 DSC2Q02487 901 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 CREB5Q02930 508 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 HHEXQ03014 270 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 TAP2Q03519 686 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 DUSP2Q05923 314 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 KDSRQ06136 332 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 EXOSC9Q06265 439 aaKnown RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 FOXL1Q12952 345 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 MALLQ13021 153 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 MSLNQ13421 630 aaPredicted RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 CUL1Q13616 776 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 ITGA7Q13683 1181 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 PTK2BQ14289 1009 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 WDR43Q15061 677 aaKnown RBP eCLIP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 ADRM1Q16186 407 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 ATP2B3Q16720 1220 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 TSTQ16762 297 aaKnown RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 DUSP28Q4G0W2 176 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 CTXN3Q4LDR2 81 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 C1orf185Q5T7R7 199 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 ATPAF1Q5TC12 328 aaPredicted RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 MBNL2Q5VZF2 373 aaKnown RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 ACAD10Q6JQN1 1059 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 TUBA3EQ6PEY2 450 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 SHQ1Q6PI26 577 aaKnown RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 FAM111BQ6SJ93 734 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 FAM180AQ6UWF9 173 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 CACNA2D4Q7Z3S7 1137 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 KRT28Q7Z3Y7 464 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 ARHGAP22Q7Z5H3 698 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 TADA2BQ86TJ2 420 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 HERC6Q8IVU3 1022 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 CMTM4Q8IZR5 234 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 TTC5Q8N0Z6 440 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 PYROXD2Q8N2H3 581 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 TCP11L2Q8N4U5 519 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 RTL3Q8N8U3 475 aaKnown RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 TRPV1Q8NER1 839 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 HUS1BQ8NHY5 278 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 CDC26Q8NHZ8 85 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 KIF18AQ8NI77 898 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 ZNF671Q8TAW3 534 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 KLHDC4Q8TBB5 520 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 MYCBPAPQ8TBZ2 947 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 GANCQ8TET4 914 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 SNX33Q8WV41 574 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 SYN2Q92777 582 aaPredicted RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 HDAC10Q969S8 669 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 RAB7BQ96AH8 199 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 PTERQ96BW5 349 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 LRRC39Q96DD0 335 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 FAM89AQ96GI7 184 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 TMEM176AQ96HP8 235 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 SUCLG2Q96I99 432 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 WWC2-AS2Q96NR7 200 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 SIN3AQ96ST3 1273 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 RAD9AQ99638 391 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 HNRNPABQ99729 332 aaKnown RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 TSG101Q99816 390 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 CCDC77Q9BR77 488 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 PYM1Q9BRP8 204 aaKnown RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 AIFM2Q9BRQ8 373 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 SIKE1Q9BRV8 207 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 GREM2Q9H772 168 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 LY9Q9HBG7 655 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 TMEM8AQ9HCN3 771 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 NRIP3Q9NQ35 241 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 TLR9Q9NR96 1032 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 FAM114A2Q9NRY5 505 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 KRT84Q9NSB2 600 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 TRNAU1APQ9NX07 287 aaKnown RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 TAS2R7Q9NYW3 318 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 AKAP7Q9P0M2 348 aaPredicted RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 C5AR2Q9P296 337 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 SLC7A8Q9UHI5 535 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 ST6GALNAC2Q9UJ37 374 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 APPL1Q9UKG1 709 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 ITGA11Q9UKX5 1188 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms