RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 HECAQ9UBI9 543 aaPredicted RBP20.23■□□□□ 0.83
ACTB-210ENST00000477812 RNF14Q9UBS8 474 aa20.23■□□□□ 0.83
ACTB-210ENST00000477812 PPM1HQ9ULR3 514 aa20.23■□□□□ 0.83
ACTB-210ENST00000477812 WASF2Q9Y6W5 498 aa20.23■□□□□ 0.83
ACTB-210ENST00000477812 TCRBV21S2A2A0A5A6 115 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 ESPNB1AK53 854 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 KRIT1O00522 736 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 INSIG1O15503 277 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 KCNN4O15554 427 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 ZNF189O75820 626 aaPredicted RBP20.22■□□□□ 0.83
ACTB-210ENST00000477812 IGSF6O95976 241 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 CD68P34810 354 aaPredicted RBP20.22■□□□□ 0.83
ACTB-210ENST00000477812 MAXP61244 160 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 SNX1Q13596 522 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 MYLK3Q32MK0 819 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 TMEM31Q5JXX7 168 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 TTC27Q6P3X3 843 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 RASSF3Q86WH2 238 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 ZNF567Q8N184 647 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 BBS5Q8N3I7 341 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 ARRDC2Q8TBH0 407 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 OR8D1Q8WZ84 308 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 MRGPRX1Q96LB2 322 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 CCDC114Q96M63 670 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 NUDCD1Q96RS6 583 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 SLC6A17Q9H1V8 727 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 SEPT10Q9P0V9 454 aa20.22■□□□□ 0.83
ACTB-210ENST00000477812 CFAP69A5D8W1 941 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 BNIP3LO60238 219 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 APBB3O95704 486 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 NDUFV2P19404 249 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 HOXA6P31267 233 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 GKP32189 559 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 CHRNA3P32297 505 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 RECQLP46063 649 aaPredicted RBP20.21■□□□□ 0.83
ACTB-210ENST00000477812 AP1S1P61966 158 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 RPS14P62263 151 aaKnown RBP20.21■□□□□ 0.83
ACTB-210ENST00000477812 NIPAL4Q0D2K0 466 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 SRLQ86TD4 932 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 TMPRSS6Q8IU80 811 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 C1orf210Q8IVY1 113 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 FAM71DQ8N9W8 422 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 MDGA1Q8NFP4 955 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 TSTD1Q8NFU3 115 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 AGAP3Q96P47 875 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 HEPHQ9BQS7 1158 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 POLR1EQ9GZS1 481 aaKnown RBP20.21■□□□□ 0.83
ACTB-210ENST00000477812 POLMQ9NP87 494 aaPredicted RBP20.21■□□□□ 0.83
ACTB-210ENST00000477812 IL36AQ9UHA7 158 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 EVLQ9UI08 416 aaPredicted RBP20.21■□□□□ 0.83
ACTB-210ENST00000477812 CDC23Q9UJX2 597 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 SARDHQ9UL12 918 aa20.21■□□□□ 0.83
ACTB-210ENST00000477812 DRG1Q9Y295 367 aaKnown RBP20.21■□□□□ 0.83
ACTB-210ENST00000477812 TTC24A2A3L6 582 aaPredicted RBP20.2■□□□□ 0.82
ACTB-210ENST00000477812 C5orf60A6NFR6 353 aa20.2■□□□□ 0.82
ACTB-210ENST00000477812 ZBTB24O43167 697 aaPredicted RBP20.2■□□□□ 0.82
ACTB-210ENST00000477812 PHF2O75151 1096 aa20.2■□□□□ 0.82
ACTB-210ENST00000477812 POP4O95707 220 aaKnown RBP20.2■□□□□ 0.82
ACTB-210ENST00000477812 MMP2P08253 660 aa20.2■□□□□ 0.82
ACTB-210ENST00000477812 METAP1P53582 386 aa20.2■□□□□ 0.82
ACTB-210ENST00000477812 DSC2Q02487 901 aa20.2■□□□□ 0.82
ACTB-210ENST00000477812 RALGPS1Q5JS13 557 aa20.2■□□□□ 0.82
ACTB-210ENST00000477812 NCEH1Q6PIU2 408 aa20.2■□□□□ 0.82
ACTB-210ENST00000477812 MMAAQ8IVH4 418 aaKnown RBP20.2■□□□□ 0.82
ACTB-210ENST00000477812 CAMKK1Q8N5S9 505 aa20.2■□□□□ 0.82
ACTB-210ENST00000477812 TMIEQ8NEW7 156 aa20.2■□□□□ 0.82
ACTB-210ENST00000477812 KIF18AQ8NI77 898 aa20.2■□□□□ 0.82
ACTB-210ENST00000477812 GRIN3AQ8TCU5 1115 aa20.2■□□□□ 0.82
ACTB-210ENST00000477812 ZNF592Q92610 1267 aa20.2■□□□□ 0.82
ACTB-210ENST00000477812 TADA1Q96BN2 335 aa20.2■□□□□ 0.82
ACTB-210ENST00000477812 SPATA13Q96N96 652 aa20.2■□□□□ 0.82
ACTB-210ENST00000477812 SEMA3CQ99985 751 aa20.2■□□□□ 0.82
ACTB-210ENST00000477812 CPEB1Q9BZB8 566 aaKnown RBP20.2■□□□□ 0.82
ACTB-210ENST00000477812 NOD2Q9HC29 1040 aa20.2■□□□□ 0.82
ACTB-210ENST00000477812 EBF1Q9UH73 591 aa20.2■□□□□ 0.82
ACTB-210ENST00000477812 TRHDEQ9UKU6 1024 aa20.2■□□□□ 0.82
ACTB-210ENST00000477812 GCATO75600 419 aa20.19■□□□□ 0.82
ACTB-210ENST00000477812 LEFTY1O75610 366 aa20.19■□□□□ 0.82
ACTB-210ENST00000477812 STIP1P31948 543 aaKnown RBP20.19■□□□□ 0.82
ACTB-210ENST00000477812 MAPK8P45983 427 aa20.19■□□□□ 0.82
ACTB-210ENST00000477812 KCNJ1P48048 391 aa20.19■□□□□ 0.82
ACTB-210ENST00000477812 SCNN1BP51168 640 aa20.19■□□□□ 0.82
ACTB-210ENST00000477812 CST6Q15828 149 aa20.19■□□□□ 0.82
ACTB-210ENST00000477812 ZNF776Q68DI1 518 aaPredicted RBP20.19■□□□□ 0.82
ACTB-210ENST00000477812 ANO7Q6IWH7 933 aa20.19■□□□□ 0.82
ACTB-210ENST00000477812 ZNF572Q7Z3I7 529 aaPredicted RBP20.19■□□□□ 0.82
ACTB-210ENST00000477812 DSG4Q86SJ6 1040 aa20.19■□□□□ 0.82
ACTB-210ENST00000477812 CCDC110Q8TBZ0 833 aa20.19■□□□□ 0.82
ACTB-210ENST00000477812 HMGB4Q8WW32 186 aa20.19■□□□□ 0.82
ACTB-210ENST00000477812 MAGOHBQ96A72 148 aaKnown RBP20.19■□□□□ 0.82
ACTB-210ENST00000477812 IMP4Q96G21 291 aaKnown RBP20.19■□□□□ 0.82
ACTB-210ENST00000477812 LRIG1Q96JA1 1093 aa20.19■□□□□ 0.82
ACTB-210ENST00000477812 TUBGCP5Q96RT8 1024 aa20.19■□□□□ 0.82
ACTB-210ENST00000477812 GORASP1Q9BQQ3 440 aa20.19■□□□□ 0.82
ACTB-210ENST00000477812 LRFN3Q9BTN0 628 aa20.19■□□□□ 0.82
ACTB-210ENST00000477812 ZDHHC6Q9H6R6 413 aa20.19■□□□□ 0.82
ACTB-210ENST00000477812 GLOD4Q9HC38 313 aa20.19■□□□□ 0.82
ACTB-210ENST00000477812 KLHL8Q9P2G9 620 aaPredicted RBP20.19■□□□□ 0.82
ACTB-210ENST00000477812 ZNF148Q9UQR1 794 aa20.19■□□□□ 0.82
ACTB-210ENST00000477812 FARP1Q9Y4F1 1045 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms