RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 FNDC3AQ9Y2H6 1198 aaKnown RBP17.96■□□□□ 0.47
PTPN7-209ENST00000477554 SNX11Q9Y5W9 270 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 TBC1D3DA0A087WVF3 549 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 TBC1D3IA0A087WXS9 549 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 TBC1D3EA0A087X179 549 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 TBC1D3KA0A087X1G2 549 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 A0A1W2PPC4 97 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 TBC1D3FA6NER0 549 aaPredicted RBP17.95■□□□□ 0.46
PTPN7-209ENST00000477554 BTNL10A8MVZ5 291 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 TBC1D3LB9A6J9 549 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 ALOX15BO15296 676 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 KCNK5O95279 499 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 TBC1D3HP0C7X1 549 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 CD59P13987 128 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 ITIH2P19823 946 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 AMPD1P23109 780 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 RGRP47804 291 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 PAPOLAP51003 745 aaKnown RBP17.95■□□□□ 0.46
PTPN7-209ENST00000477554 TAS2R40P59535 323 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 FAM182AQ5T1J6 154 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 AFMIDQ63HM1 303 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 TBC1D3GQ6DHY5 549 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 TBC1D3CQ6IPX1 549 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 KDM7AQ6ZMT4 941 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 PARS2Q7L3T8 475 aaKnown RBP17.95■□□□□ 0.46
PTPN7-209ENST00000477554 ZSCAN30Q86W11 494 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 TBC1D3Q8IZP1 549 aaPredicted RBP17.95■□□□□ 0.46
PTPN7-209ENST00000477554 ZNF564Q8TBZ8 553 aaPredicted RBP17.95■□□□□ 0.46
PTPN7-209ENST00000477554 MYOCQ99972 504 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.95■□□□□ 0.46
PTPN7-209ENST00000477554 HECAQ9UBI9 543 aaPredicted RBP17.95■□□□□ 0.46
PTPN7-209ENST00000477554 LHX3Q9UBR4 397 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 ZFR2Q9UPR6 939 aaKnown RBP17.95■□□□□ 0.46
PTPN7-209ENST00000477554 ITM2BQ9Y287 266 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 WDFY3Q8IZQ1 3526 aa17.95■□□□□ 0.46
PTPN7-209ENST00000477554 A0A0A6YYK5 440 aaPredicted RBP17.94■□□□□ 0.46
PTPN7-209ENST00000477554 C1QTNF3-AMACRE9PGA6 284 aa17.94■□□□□ 0.46
PTPN7-209ENST00000477554 SPINT1O43278 529 aa17.94■□□□□ 0.46
PTPN7-209ENST00000477554 GNSP15586 552 aa17.94■□□□□ 0.46
PTPN7-209ENST00000477554 PCK1P35558 622 aa17.94■□□□□ 0.46
PTPN7-209ENST00000477554 GJC1P36383 396 aa17.94■□□□□ 0.46
PTPN7-209ENST00000477554 SEL1L3Q68CR1 1132 aa17.94■□□□□ 0.46
PTPN7-209ENST00000477554 ERMP1Q7Z2K6 904 aa17.94■□□□□ 0.46
PTPN7-209ENST00000477554 POLNQ7Z5Q5 900 aa17.94■□□□□ 0.46
PTPN7-209ENST00000477554 RHOT2Q8IXI1 618 aa17.94■□□□□ 0.46
PTPN7-209ENST00000477554 PCDH20Q8N6Y1 951 aaKnown RBP17.94■□□□□ 0.46
PTPN7-209ENST00000477554 NIPA2Q8N8Q9 360 aa17.94■□□□□ 0.46
PTPN7-209ENST00000477554 TMIEQ8NEW7 156 aa17.94■□□□□ 0.46
PTPN7-209ENST00000477554 CALR3Q96L12 384 aaKnown RBP17.94■□□□□ 0.46
PTPN7-209ENST00000477554 CEP44Q9C0F1 390 aa17.94■□□□□ 0.46
PTPN7-209ENST00000477554 PCED1AQ9H1Q7 454 aa17.94■□□□□ 0.46
PTPN7-209ENST00000477554 CATSPERBQ9H7T0 1116 aa17.94■□□□□ 0.46
PTPN7-209ENST00000477554 FZD3Q9NPG1 666 aa17.94■□□□□ 0.46
PTPN7-209ENST00000477554 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.94■□□□□ 0.46
PTPN7-209ENST00000477554 ASPMQ8IZT6 3477 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 TTC24A2A3L6 582 aaPredicted RBP17.93■□□□□ 0.46
PTPN7-209ENST00000477554 LRRC72A6NJI9 287 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 FGF10O15520 208 aaPredicted RBP17.93■□□□□ 0.46
PTPN7-209ENST00000477554 PRLRP16471 622 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 SDHBP21912 280 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 IL4RP24394 825 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 MSNP26038 577 aaKnown RBP17.93■□□□□ 0.46
PTPN7-209ENST00000477554 ETFBP38117 255 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 ABL2P42684 1182 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 IL9RQ01113 521 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 SLC20A2Q08357 652 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 DPYSL2Q16555 572 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 HLA-BQ31612 363 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 N4BP2L1Q5TBK1 243 aaPredicted RBP17.93■□□□□ 0.46
PTPN7-209ENST00000477554 FAM46CQ5VWP2 391 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 DSG4Q86SJ6 1040 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 REXO1L1PQ8IX06 675 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 RYBPQ8N488 228 aaPredicted RBP17.93■□□□□ 0.46
PTPN7-209ENST00000477554 LRRN4Q8WUT4 740 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 RFFLQ8WZ73 363 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 HEPHQ9BQS7 1158 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 LACRTQ9GZZ8 138 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 GAREM1Q9H706 876 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 PCDH18Q9HCL0 1135 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 TRMT1Q9NXH9 659 aaKnown RBP17.93■□□□□ 0.46
PTPN7-209ENST00000477554 CTTNBP2NLQ9P2B4 639 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 UVRAGQ9P2Y5 699 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 SUSD2Q9UGT4 822 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 ANKRD6Q9Y2G4 727 aa17.93■□□□□ 0.46
PTPN7-209ENST00000477554 A0A1W2PR77 199 aa17.92■□□□□ 0.46
PTPN7-209ENST00000477554 RCCD1A6NED2 376 aa17.92■□□□□ 0.46
PTPN7-209ENST00000477554 TMEM110-MUSTN1A8MSY1 372 aa17.92■□□□□ 0.46
PTPN7-209ENST00000477554 KRIT1O00522 736 aa17.92■□□□□ 0.46
PTPN7-209ENST00000477554 MUSKO15146 869 aa17.92■□□□□ 0.46
PTPN7-209ENST00000477554 LATO43561 262 aa17.92■□□□□ 0.46
PTPN7-209ENST00000477554 RNGTTO60942 597 aaKnown RBP17.92■□□□□ 0.46
PTPN7-209ENST00000477554 TOP3BO95985 862 aaKnown RBP17.92■□□□□ 0.46
PTPN7-209ENST00000477554 UGT2B4P06133 528 aa17.92■□□□□ 0.46
PTPN7-209ENST00000477554 DPP6P42658 865 aa17.92■□□□□ 0.46
PTPN7-209ENST00000477554 NOVA1P51513 510 aaKnown RBP17.92■□□□□ 0.46
PTPN7-209ENST00000477554 ARSEP51690 589 aa17.92■□□□□ 0.46
PTPN7-209ENST00000477554 FGL2Q14314 439 aa17.92■□□□□ 0.46
PTPN7-209ENST00000477554 IFI16Q16666 785 aaKnown RBP17.92■□□□□ 0.46
PTPN7-209ENST00000477554 ERN2Q76MJ5 926 aaKnown RBP17.92■□□□□ 0.46
PTPN7-209ENST00000477554 PIP4P1Q86T03 277 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms