RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 HNRNPKP61978 463 aaKnown RBP eCLIP11.56□□□□□ -0.56
HDLBP-236ENST00000477477 FZD2Q14332 565 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 ZNF542PQ5EBM4 170 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 FAM72AQ5TYM5 149 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 FAM72DQ6L9T8 149 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 KDM7AQ6ZMT4 941 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 TRIM72Q6ZMU5 477 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 LRRC69Q6ZNQ3 347 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 STRADAQ7RTN6 431 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 TMC6Q7Z403 805 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 PHLDB2Q86SQ0 1253 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 FAM72BQ86X60 149 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 FAM181AQ8N9Y4 354 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 OR6K2Q8NGY2 324 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 JOSD2Q8TAC2 188 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 SLC30A5Q8TAD4 765 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 ENOX1Q8TC92 643 aaKnown RBP11.56□□□□□ -0.56
HDLBP-236ENST00000477477 GPT2Q8TD30 523 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 RAB7BQ96AH8 199 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 TBC1D31Q96DN5 1066 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 APOLD1Q96LR9 279 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 LENG8Q96PV6 779 aaPredicted RBP11.56□□□□□ -0.56
HDLBP-236ENST00000477477 KLF6Q99612 283 aaPredicted RBP11.56□□□□□ -0.56
HDLBP-236ENST00000477477 DUSP23Q9BVJ7 150 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 FAM207AQ9NSI2 230 aaPredicted RBP11.56□□□□□ -0.56
HDLBP-236ENST00000477477 DNAI1Q9UI46 699 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 DOCK9Q9BZ29 2069 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 LY6G6EA0A0G2JKS1 128 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 SPTY2D1-AS1A0A0U1RR47 76 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 IGLON5A6NGN9 336 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 C16orf96A6NNT2 1141 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 K7ESM1 405 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 EPHB6O15197 1021 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 TSPAN6O43657 245 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 OPA1O60313 960 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 RAMP2O60895 175 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 NEBLO76041 1014 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 GJB6O95452 261 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 GSRP00390 522 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 CSF2P04141 144 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 GP1BAP07359 652 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 PLEKP08567 350 aaPredicted RBP11.55□□□□□ -0.56
HDLBP-236ENST00000477477 NME1P15531 152 aaKnown RBP11.55□□□□□ -0.56
HDLBP-236ENST00000477477 HDAC4P56524 1084 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 PFN3P60673 137 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 PTP4A2Q12974 167 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 SGCGQ13326 291 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 POLD3Q15054 466 aaPredicted RBP11.55□□□□□ -0.56
HDLBP-236ENST00000477477 KRT31Q15323 416 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 TBC1D25Q3MII6 688 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 ZNF805Q5CZA5 627 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 CDKAL1Q5VV42 579 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 CDCP2Q5VXM1 449 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 PARGQ86W56 976 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 RYBPQ8N488 228 aaPredicted RBP11.55□□□□□ -0.56
HDLBP-236ENST00000477477 CCDC185Q8N715 623 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 DENND6BQ8NEG7 585 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 ZNF548Q8NEK5 533 aaPredicted RBP11.55□□□□□ -0.56
HDLBP-236ENST00000477477 OR2AP1Q8NGE2 309 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 ASB12Q8WXK4 309 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 CENPIQ92674 756 aaPredicted RBP11.55□□□□□ -0.56
HDLBP-236ENST00000477477 FGF11Q92914 225 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 VOPP1Q96AW1 172 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 UBL7Q96S82 380 aaPredicted RBP11.55□□□□□ -0.56
HDLBP-236ENST00000477477 C1QTNF2Q9BXJ5 285 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 MAGEB5Q9BZ81 275 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 MAGEH1Q9H213 219 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 VPS16Q9H269 839 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 PRORYQ9H606 182 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 USP29Q9HBJ7 922 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 NLRC4Q9NPP4 1024 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 EVA1BQ9NVM1 165 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 GGT7Q9UJ14 662 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 HPCAL4Q9UM19 191 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 ITM2BQ9Y287 266 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 DAAM1Q9Y4D1 1078 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 PCDHB1Q9Y5F3 818 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 U3KQA8 63 aa11.55□□□□□ -0.56
HDLBP-236ENST00000477477 DOCK4Q8N1I0 1966 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 ASXL3Q9C0F0 2248 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 EIF4E1BA6NMX2 242 aaKnown RBP11.54□□□□□ -0.56
HDLBP-236ENST00000477477 H3BM21 787 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 KRIT1O00522 736 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 NEMP1O14524 444 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 FPGTO14772 594 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 SPINT1O43278 529 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 UGT2B4P06133 528 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 TPM2P07951 284 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 KRT3P12035 628 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 UNGP13051 313 aaPredicted RBP11.54□□□□□ -0.56
HDLBP-236ENST00000477477 MYF5P13349 255 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 ACTN2P35609 894 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 STAT1P42224 750 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 NSFP46459 744 aaKnown RBP11.54□□□□□ -0.56
HDLBP-236ENST00000477477 DUSP3P51452 185 aaPredicted RBP11.54□□□□□ -0.56
HDLBP-236ENST00000477477 SNRPD1P62314 119 aaKnown RBP11.54□□□□□ -0.56
HDLBP-236ENST00000477477 PDE1CQ14123 709 aaPredicted RBP11.54□□□□□ -0.56
HDLBP-236ENST00000477477 TPRG1LQ5T0D9 272 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 FKBP15Q5T1M5 1219 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 LEKR1Q6ZMV7 388 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms