RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TULP2O00295 520 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 ALOX15BO15296 676 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 MOCS2O96007 188 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-214ENST00000477152 IL1BP01584 269 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 CCR1P32246 355 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 GIPRP48546 466 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 YWHAZP63104 245 aaKnown RBP7.47□□□□□ -1.21
BRCA1-214ENST00000477152 KRT83P78385 493 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 E2F1Q01094 437 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 STAT4Q14765 748 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 SETMARQ53H47 684 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-214ENST00000477152 CCDC157Q569K6 752 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 FAM133BQ5BKY9 247 aaKnown RBP7.47□□□□□ -1.21
BRCA1-214ENST00000477152 EFHC1Q5JVL4 640 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 NCEH1Q6PIU2 408 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 ACAD11Q709F0 780 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 HDXQ7Z353 690 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 LSRQ86X29 649 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-214ENST00000477152 MMAAQ8IVH4 418 aaKnown RBP7.47□□□□□ -1.21
BRCA1-214ENST00000477152 LGI2Q8N0V4 545 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 CELF2-AS1Q8N7Q2 184 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 ZNF366Q8N895 744 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 DQX1Q8TE96 717 aaKnown RBP7.47□□□□□ -1.21
BRCA1-214ENST00000477152 ERCC4Q92889 916 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-214ENST00000477152 SERAC1Q96JX3 654 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 CNDP2Q96KP4 475 aaKnown RBP7.47□□□□□ -1.21
BRCA1-214ENST00000477152 DYRK4Q9NR20 520 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 ENAMQ9NRM1 1142 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 RRN3Q9NYV6 651 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.46□□□□□ -1.21
BRCA1-214ENST00000477152 GOLGA6L7A0A1B0GV03 622 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 A0A1B0GVM2 712 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 TCAF2A6NFQ2 919 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 TLR4O00206 839 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 MID1O15344 667 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 KLF4O43474 513 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 AFPP02771 609 aaKnown RBP7.46□□□□□ -1.21
BRCA1-214ENST00000477152 ALPPL2P10696 532 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 TACR2P21452 398 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 ABCG1P45844 678 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 PSMD8P48556 350 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 BNC1Q01954 994 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 CYP4F3Q08477 520 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 ZNF177Q13360 481 aaPredicted RBP7.46□□□□□ -1.21
BRCA1-214ENST00000477152 COL28A1Q2UY09 1125 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 ACCSLQ4AC99 568 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 DCAF6Q58WW2 860 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 EXOSC6Q5RKV6 272 aaKnown RBP7.46□□□□□ -1.21
BRCA1-214ENST00000477152 NAPEPLDQ6IQ20 393 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 C19orf48Q6RUI8 117 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 DTWD1Q8N5C7 304 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 UBR7Q8N806 425 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 MFSD2AQ8NA29 543 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 MDM1Q8TC05 714 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 FCRL2Q96LA5 508 aaPredicted RBP7.46□□□□□ -1.21
BRCA1-214ENST00000477152 TMPRSS13Q9BYE2 586 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 NEUROG2Q9H2A3 272 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 GOLPH3LQ9H4A5 285 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 FAM204AQ9H8W3 233 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 ASNSD1Q9NWL6 643 aa7.46□□□□□ -1.21
BRCA1-214ENST00000477152 NYNRINQ9P2P1 1898 aaKnown RBP7.46□□□□□ -1.21
BRCA1-214ENST00000477152 PLXNA2O75051 1894 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 KCNU1A8MYU2 1149 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 PIK3R2O00459 728 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 THAP12O43422 761 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 TRUB2O95900 331 aaKnown RBP7.46□□□□□ -1.22
BRCA1-214ENST00000477152 CAPNS1P04632 268 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 IGHV4-34P06331 123 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 SLC6A4P31645 630 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 RECQLP46063 649 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-214ENST00000477152 RXRGP48443 463 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 PLK1P53350 603 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 RAC1P63000 192 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 C9orf64Q5T6V5 341 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 NEK5Q6P3R8 708 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 UBE3DQ7Z6J8 389 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 ZSCAN30Q86W11 494 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 MSANTD4Q8NCY6 345 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 TFAP2BQ92481 460 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 SLC39A13Q96H72 371 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 PPP1R16AQ96I34 528 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 SLC6A18Q96N87 628 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 UBL7Q96S82 380 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-214ENST00000477152 SYNCQ9H7C4 482 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 PREBQ9HCU5 417 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 REV1Q9UBZ9 1251 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 RALYQ9UKM9 306 aaKnown RBP7.46□□□□□ -1.22
BRCA1-214ENST00000477152 NAALADL1Q9UQQ1 740 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 RAXQ9Y2V3 346 aa7.46□□□□□ -1.22
BRCA1-214ENST00000477152 CEP295Q9C0D2 2601 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 A0A087WV48 116 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 PRAMEF26H0Y7S4 382 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 TMPRSS2O15393 492 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 HSF2BPO75031 334 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 CLDN11O75508 207 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 LETM1O95202 739 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-214ENST00000477152 ACTN2P35609 894 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 GPD2P43304 727 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 RPL34P49207 117 aaKnown RBP7.45□□□□□ -1.22
BRCA1-214ENST00000477152 DUSP3P51452 185 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms