RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 C2CD4BA6NLJ0 364 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 A6NNZ2 444 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 LRIG2O94898 1065 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 MPOP05164 745 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 UGT2B4P06133 528 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 PLEKP08567 350 aaPredicted RBP11.86□□□□□ -0.51
VARS2-208ENST00000477052 EEF1GP26641 437 aaKnown RBP11.86□□□□□ -0.51
VARS2-208ENST00000477052 SDC4P31431 198 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 RFC1P35251 1148 aaPredicted RBP11.86□□□□□ -0.51
VARS2-208ENST00000477052 SOX5P35711 763 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 HDAC4P56524 1084 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 JAM2P57087 298 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 RPS21P63220 83 aaKnown RBP11.86□□□□□ -0.51
VARS2-208ENST00000477052 PTP4A2Q12974 167 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 TCEA2Q15560 299 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 CDKAL1Q5VV42 579 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 ZNF783Q6ZMS7 281 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 CLEC17AQ6ZS10 378 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 NYAP1Q6ZVC0 841 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 ZNF354CQ86Y25 554 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 DCBLD1Q8N8Z6 715 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 MSANTD4Q8NCY6 345 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 FAM172AQ8WUF8 416 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 FEM1CQ96JP0 617 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 PCMTD1Q96MG8 357 aaPredicted RBP11.86□□□□□ -0.51
VARS2-208ENST00000477052 KLHL32Q96NJ5 620 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 KLF6Q99612 283 aaPredicted RBP11.86□□□□□ -0.51
VARS2-208ENST00000477052 CEP44Q9C0F1 390 aa11.86□□□□□ -0.51
VARS2-208ENST00000477052 TCEAL2Q9H3H9 227 aaPredicted RBP11.86□□□□□ -0.51
VARS2-208ENST00000477052 SEPT11Q9NVA2 429 aaKnown RBP11.86□□□□□ -0.51
VARS2-208ENST00000477052 PPARGC1AQ9UBK2 798 aaKnown RBP11.86□□□□□ -0.51
VARS2-208ENST00000477052 PNMA8BQ9ULN7 279 aaPredicted RBP11.86□□□□□ -0.51
VARS2-208ENST00000477052 K7ESM1 405 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 NEMP1O14524 444 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 SCAMP1O15126 338 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 INSIG1O15503 277 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 BUB1O43683 1085 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 OPA1O60313 960 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 MMP20O60882 483 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 RHOQP17081 205 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 SLC20A2Q08357 652 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 CCDC15Q0P6D6 951 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 SGCGQ13326 291 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 ILKQ13418 452 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 C1orf61Q13536 156 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 PDE1CQ14123 709 aaPredicted RBP11.85□□□□□ -0.51
VARS2-208ENST00000477052 RTP5Q14D33 572 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 SYCP1Q15431 976 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 CDKN3Q16667 212 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 DEFB133Q30KQ1 61 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 SCYL2Q6P3W7 929 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 WDR59Q6PJI9 974 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 RBFAQ8N0V3 343 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 ZNF548Q8NEK5 533 aaPredicted RBP11.85□□□□□ -0.51
VARS2-208ENST00000477052 LMX1AQ8TE12 382 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 TBC1D31Q96DN5 1066 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 NRSN2Q9GZP1 204 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 NOL6Q9H6R4 1146 aaKnown RBP11.85□□□□□ -0.51
VARS2-208ENST00000477052 LMBRD1Q9NUN5 540 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 ADAM22Q9P0K1 906 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 IPO11Q9UI26 975 aaKnown RBP11.85□□□□□ -0.51
VARS2-208ENST00000477052 SIK3Q9Y2K2 1263 aa11.85□□□□□ -0.51
VARS2-208ENST00000477052 SPTY2D1-AS1A0A0U1RR47 76 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 CPED1A4D0V7 1026 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 PMS2P1A4D2B8 440 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 CCP110O43303 1012 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 RAMP2O60895 175 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 TMCC1O94876 653 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 CDK4P11802 303 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 KRT3P12035 628 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 CKMT1AP12532 417 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 UNGP13051 313 aaPredicted RBP11.84□□□□□ -0.51
VARS2-208ENST00000477052 COPB1P53618 953 aaKnown RBP11.84□□□□□ -0.51
VARS2-208ENST00000477052 EIF2B5Q13144 721 aaKnown RBP11.84□□□□□ -0.51
VARS2-208ENST00000477052 POLD3Q15054 466 aaPredicted RBP11.84□□□□□ -0.51
VARS2-208ENST00000477052 CLEC16AQ2KHT3 1053 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 MYLK3Q32MK0 819 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 ARL13BQ3SXY8 428 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 HS1BP3Q53T59 392 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 ZNF805Q5CZA5 627 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 KIAA1161Q6NSJ0 714 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 GUSBP11Q6P575 273 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 KYAT3Q6YP21 454 aaKnown RBP11.84□□□□□ -0.51
VARS2-208ENST00000477052 ARCQ7LC44 396 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 VPS36Q86VN1 386 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 ZNF677Q86XU0 584 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 DNAAF5Q86Y56 855 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 OR2AP1Q8NGE2 309 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 ENOX1Q8TC92 643 aaKnown RBP11.84□□□□□ -0.51
VARS2-208ENST00000477052 RFFLQ8WZ73 363 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 CENPIQ92674 756 aaPredicted RBP11.84□□□□□ -0.51
VARS2-208ENST00000477052 EXOC2Q96KP1 924 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 WRAP53Q9BUR4 548 aaKnown RBP11.84□□□□□ -0.51
VARS2-208ENST00000477052 C1QTNF2Q9BXJ5 285 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 MBNL1Q9NR56 388 aaKnown RBP11.84□□□□□ -0.51
VARS2-208ENST00000477052 GPR27Q9NS67 375 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 TMEM248Q9NWD8 314 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 GPATCH2LQ9NWQ4 482 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 NLGN3Q9NZ94 848 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 COQ6Q9Y2Z9 468 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms