RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 MSLNQ13421 630 aaPredicted RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 CDH18Q13634 790 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 SGO1Q5FBB7 561 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 OLFML2AQ68BL7 652 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 SLC9A4Q6AI14 798 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 VN1R5Q7Z5H4 357 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 PROSER1Q86XN7 944 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 C10orf53Q8N6V4 93 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 ITFG1Q8TB96 612 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 SPPL2AQ8TCT8 520 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 CD101Q93033 1021 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 PTCD3Q96EY7 689 aaKnown RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 NTPCRQ9BSD7 190 aaKnown RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 XKR8Q9H6D3 395 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 CATSPERBQ9H7T0 1116 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 REEP1Q9H902 201 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 APOBEC3GQ9HC16 384 aaKnown RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 PRDM8Q9NQV8 689 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 ERGIC3Q9Y282 383 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 PAPPAQ13219 1627 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 COL4A1P02462 1669 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 hCG_1818297A0A087WSY0 165 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 EPN2O95208 641 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 NADKO95544 446 aaPredicted RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 SERPIND1P05546 499 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 TPBGLP0DKB5 382 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 ATXN8OSP0DMR3 200 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 CYP2C8P10632 490 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 RARBP10826 455 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 NCAM1P13591 858 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 CHRM3P20309 590 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 NPR2P20594 1047 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 EIF4BP23588 611 aaKnown RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 S100A2P29034 98 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 WDR4P57081 412 aaKnown RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 EIF5AP63241 154 aaKnown RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 TNK2Q07912 1038 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 GRSF1Q12849 480 aaKnown RBP eCLIP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 CDC16Q13042 620 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 MPP2Q14168 576 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 FRG1Q14331 258 aaKnown RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 TMEM132DQ14C87 1099 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 LY6KQ17RY6 165 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 C15orf59Q2T9L4 293 aaPredicted RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 EIF2S3LQ2VIR3 472 aaKnown RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 PDCD4Q53EL6 469 aaKnown RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 FAM182AQ5T1J6 154 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 DPY19L2P1Q6NXN4 242 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 TXNDC11Q6PKC3 985 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 NECAB2Q7Z6G3 386 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 SLC25A41Q8N5S1 370 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 GLIS1Q8NBF1 620 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 OR8H1Q8NGG4 311 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 MCFD2Q8NI22 146 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 C18orf25Q96B23 403 aaPredicted RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 MTG1Q9BT17 334 aaPredicted RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 NT5C1AQ9BXI3 368 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 RPS6KB2Q9UBS0 482 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 RUVBL2Q9Y230 463 aaKnown RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 MGAT4DA6NG13 374 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 KPNA3O00505 521 aaPredicted RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 EDF1O60869 148 aaKnown RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 TRMUO75648 421 aaKnown RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 ABHD2P08910 425 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 DBTP11182 482 aaKnown RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 DARSP14868 501 aaKnown RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 GALK1P51570 392 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 GEMP55040 296 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 USP46P62068 366 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 RBP5P82980 135 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 TRIM32Q13049 653 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 PARP6Q2NL67 630 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 GLRA4Q5JXX5 417 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 CHADLQ6NUI6 762 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 SLC39A4Q6P5W5 647 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 ULK3Q6PHR2 472 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 MPZL3Q6UWV2 235 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 CHSY1Q86X52 802 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 GALNT6Q8NCL4 622 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 TP53INP1Q96A56 240 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 CDRT15Q96T59 188 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 C1QTNF1Q9BXJ1 281 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 ZCWPW1Q9H0M4 648 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 COPS7BQ9H9Q2 264 aaPredicted RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 CAB39LQ9H9S4 337 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 VPS45Q9NRW7 570 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 LIMD1Q9UGP4 676 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 GPN3Q9UHW5 284 aaPredicted RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 RNF112Q9ULX5 631 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 PLCL2Q9UPR0 1127 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 ATRNL1Q5VV63 1379 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 RGSL1A5PLK6 1076 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 H3BN98 237 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 EEF2KO00418 725 aaKnown RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 PLSCR1O15162 318 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 NPTXRO95502 500 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 ASS1P00966 412 aaKnown RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 MPOP05164 745 aa6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 HOXB8P17481 243 aaPredicted RBP6.17□□□□□ -1.42
HNRNPU-208ENST00000475997 PTSQ03393 145 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms