RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 MIIPQ5JXC2 388 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 TRNP1Q6NT89 227 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 RETSATQ6NUM9 610 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 KYAT3Q6YP21 454 aaKnown RBP7.34□□□□□ -1.23
UBE4B-208ENST00000475795 KDM7AQ6ZMT4 941 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 Q6ZSR6 202 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 TMC6Q7Z403 805 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 PTAR1Q7Z6K3 402 aaPredicted RBP7.34□□□□□ -1.23
UBE4B-208ENST00000475795 RETREG3Q86VR2 466 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 ZSCAN30Q86W11 494 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 ERICH1Q86X53 443 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 FAM114A1Q8IWE2 563 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 FAM181AQ8N9Y4 354 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 MLKLQ8NB16 471 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 MSANTD4Q8NCY6 345 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 BMFQ96LC9 184 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 APOLD1Q96LR9 279 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 FCRL3Q96P31 734 aaPredicted RBP7.34□□□□□ -1.23
UBE4B-208ENST00000475795 HAPLN3Q96S86 360 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 HEPHQ9BQS7 1158 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 SPON2Q9BUD6 331 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 DUSP23Q9BVJ7 150 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 SLC17A9Q9BYT1 436 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 ZYG11BQ9C0D3 744 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 PDCL3Q9H2J4 239 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 NDST4Q9H3R1 872 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 CAAP1Q9H8G2 361 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 USP29Q9HBJ7 922 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 ATP13A1Q9HD20 1204 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 PPARGC1AQ9UBK2 798 aaKnown RBP7.34□□□□□ -1.23
UBE4B-208ENST00000475795 FCF1Q9Y324 198 aaKnown RBP7.34□□□□□ -1.23
UBE4B-208ENST00000475795 PCDHB1Q9Y5F3 818 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 FADS3Q9Y5Q0 445 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 FHOD1Q9Y613 1164 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 HS3ST3A1Q9Y663 406 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 U3KQA8 63 aa7.34□□□□□ -1.23
UBE4B-208ENST00000475795 UNC13CQ8NB66 2214 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 HELZ2Q9BYK8 2649 aaKnown RBP7.33□□□□□ -1.24
UBE4B-208ENST00000475795 SPTY2D1-AS1A0A0U1RR47 76 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 CXorf51AA0A1B0GTR3 108 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 POM121BA6NF01 834 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 NEMP2A6NFY4 417 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 GOLGA8SH3BPF8 625 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 K7ESM1 405 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 SCAMP1O15126 338 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 RAD51BO15315 384 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 AP1G1O43747 822 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 LZTS3O60299 673 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-208ENST00000475795 OPA1O60313 960 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 C1QL1O75973 258 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 DXOO77932 396 aaKnown RBP7.33□□□□□ -1.24
UBE4B-208ENST00000475795 CD160O95971 181 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 PRB1P04280 392 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 NME1P15531 152 aaKnown RBP7.33□□□□□ -1.24
UBE4B-208ENST00000475795 RABIFP47224 123 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 DUSP3P51452 185 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-208ENST00000475795 CCNHP51946 323 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-208ENST00000475795 HNRNPKP61978 463 aaKnown RBP eCLIP7.33□□□□□ -1.24
UBE4B-208ENST00000475795 NOMO3P69849 1222 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 NRG1Q02297 640 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-208ENST00000475795 GNA12Q03113 381 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 TLE3Q04726 772 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 CCDC173Q0VFZ6 552 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 FZD2Q14332 565 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 MSS51Q4VC12 460 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 VWA3BQ502W6 1294 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 C2CD6Q53TS8 623 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 ZNF542PQ5EBM4 170 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 CARD16Q5EG05 197 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 KLHDC7AQ5VTJ3 777 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 TAF3Q5VWG9 929 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 PARS2Q7L3T8 475 aaKnown RBP7.33□□□□□ -1.24
UBE4B-208ENST00000475795 ARCQ7LC44 396 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 NOP9Q86U38 636 aaKnown RBP7.33□□□□□ -1.24
UBE4B-208ENST00000475795 PARGQ86W56 976 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 FAM131BQ86XD5 332 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 SPACA3Q8IXA5 215 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 LSM14AQ8ND56 463 aaKnown RBP7.33□□□□□ -1.24
UBE4B-208ENST00000475795 ZNF548Q8NEK5 533 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-208ENST00000475795 FEM1CQ96JP0 617 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 CFAP57Q96MR6 1250 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 ZNF578Q96N58 590 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-208ENST00000475795 LENG8Q96PV6 779 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-208ENST00000475795 DEPDC7Q96QD5 511 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 TUBGCP2Q9BSJ2 902 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 NAA15Q9BXJ9 866 aaKnown RBP7.33□□□□□ -1.24
UBE4B-208ENST00000475795 ZMYND15Q9H091 742 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 ZDHHC6Q9H6R6 413 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 EVA1BQ9NVM1 165 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 DNAJC28Q9NX36 388 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 HECAQ9UBI9 543 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-208ENST00000475795 TMEM59LQ9UK28 342 aa7.33□□□□□ -1.24
UBE4B-208ENST00000475795 GCN1Q92616 2671 aaKnown RBP7.33□□□□□ -1.24
UBE4B-208ENST00000475795 ARHGEF17Q96PE2 2063 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-208ENST00000475795 SCN8AQ9UQD0 1980 aa7.32□□□□□ -1.24
UBE4B-208ENST00000475795 TEX51A0A1B0GUA7 166 aa7.32□□□□□ -1.24
UBE4B-208ENST00000475795 FAM170AA1A519 330 aa7.32□□□□□ -1.24
UBE4B-208ENST00000475795 F8VZ95 297 aa7.32□□□□□ -1.24
UBE4B-208ENST00000475795 H3BM21 787 aa7.32□□□□□ -1.24
UBE4B-208ENST00000475795 FPGTO14772 594 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms