RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 CD27P26842 260 aa14.67□□□□□ -0.06
ABCF3-211ENST00000475728 HSPA9P38646 679 aaKnown RBP14.67□□□□□ -0.06
ABCF3-211ENST00000475728 RENBPP51606 427 aa14.67□□□□□ -0.06
ABCF3-211ENST00000475728 NEK3P51956 506 aa14.67□□□□□ -0.06
ABCF3-211ENST00000475728 VAV2P52735 878 aa14.67□□□□□ -0.06
ABCF3-211ENST00000475728 IFI16Q16666 785 aaKnown RBP14.67□□□□□ -0.06
ABCF3-211ENST00000475728 ANKRD20A8PQ5CZ79 823 aa14.67□□□□□ -0.06
ABCF3-211ENST00000475728 AGBL4Q5VU57 503 aa14.67□□□□□ -0.06
ABCF3-211ENST00000475728 C11orf63Q6NUN7 778 aa14.67□□□□□ -0.06
ABCF3-211ENST00000475728 NEK5Q6P3R8 708 aa14.67□□□□□ -0.06
ABCF3-211ENST00000475728 RAD9BQ6WBX8 426 aa14.67□□□□□ -0.06
ABCF3-211ENST00000475728 KIAA1328Q86T90 577 aa14.67□□□□□ -0.06
ABCF3-211ENST00000475728 FAF2Q96CS3 445 aa14.67□□□□□ -0.06
ABCF3-211ENST00000475728 CINPQ9BW66 212 aaPredicted RBP14.67□□□□□ -0.06
ABCF3-211ENST00000475728 MAK16Q9BXY0 300 aaKnown RBP14.67□□□□□ -0.06
ABCF3-211ENST00000475728 ZDHHC5Q9C0B5 715 aa14.67□□□□□ -0.06
ABCF3-211ENST00000475728 MIR1-1HGQ9H1L0 117 aa14.67□□□□□ -0.06
ABCF3-211ENST00000475728 TMEM74BQ9NUR3 256 aa14.67□□□□□ -0.06
ABCF3-211ENST00000475728 HAUS2Q9NVX0 235 aa14.67□□□□□ -0.06
ABCF3-211ENST00000475728 SEPT3Q9UH03 358 aa14.67□□□□□ -0.06
ABCF3-211ENST00000475728 CDV3Q9UKY7 258 aaKnown RBP14.67□□□□□ -0.06
ABCF3-211ENST00000475728 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.67□□□□□ -0.06
ABCF3-211ENST00000475728 MFHAS1Q9Y4C4 1052 aa14.67□□□□□ -0.06
ABCF3-211ENST00000475728 ACTL7AQ9Y615 435 aa14.67□□□□□ -0.06
ABCF3-211ENST00000475728 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.67□□□□□ -0.06
ABCF3-211ENST00000475728 ATXN2Q99700 1313 aaKnown RBP14.66□□□□□ -0.06
ABCF3-211ENST00000475728 CHD5Q8TDI0 1954 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 TBC1D3DA0A087WVF3 549 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 TBC1D3IA0A087WXS9 549 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 TBC1D3EA0A087X179 549 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 TBC1D3KA0A087X1G2 549 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 TBC1D3FA6NER0 549 aaPredicted RBP14.66□□□□□ -0.06
ABCF3-211ENST00000475728 TBC1D3LB9A6J9 549 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 NRDCO43847 1150 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 BUB1BO60566 1050 aaPredicted RBP14.66□□□□□ -0.06
ABCF3-211ENST00000475728 CD48P09326 243 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 TBC1D3HP0C7X1 549 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 ZFXP17010 805 aaPredicted RBP14.66□□□□□ -0.06
ABCF3-211ENST00000475728 MX2P20592 715 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 COMTP21964 271 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 MAPK8P45983 427 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 CSNK1DP48730 415 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 LIMK1P53667 647 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 ATXN3P54252 364 aaPredicted RBP14.66□□□□□ -0.06
ABCF3-211ENST00000475728 MMRN1Q13201 1228 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 PUM1Q14671 1186 aaKnown RBP eCLIP14.66□□□□□ -0.06
ABCF3-211ENST00000475728 PAFAH1B3Q15102 231 aaKnown RBP14.66□□□□□ -0.06
ABCF3-211ENST00000475728 CYTH1Q15438 398 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 TEAD4Q15561 434 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 POM121L1PQ3SYA9 428 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 ATP13A4Q4VNC1 1196 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 ZNF805Q5CZA5 627 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 TBC1D3GQ6DHY5 549 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 TBC1D3CQ6IPX1 549 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 FBXL19Q6PCT2 694 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 ZSCAN30Q86W11 494 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 CPNE8Q86YQ8 564 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 TBC1D3Q8IZP1 549 aaPredicted RBP14.66□□□□□ -0.06
ABCF3-211ENST00000475728 CCDC112Q8NEF3 446 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 PCDH19Q8TAB3 1148 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.66□□□□□ -0.06
ABCF3-211ENST00000475728 RAB7BQ96AH8 199 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 ARRDC3Q96B67 414 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 SKA1Q96BD8 255 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 BIRC7Q96CA5 298 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 ZNF830Q96NB3 372 aaPredicted RBP14.66□□□□□ -0.06
ABCF3-211ENST00000475728 EDEM2Q9BV94 578 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 CPEB1Q9BZB8 566 aaKnown RBP14.66□□□□□ -0.06
ABCF3-211ENST00000475728 SMOC1Q9H4F8 434 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 ETNK2Q9NVF9 386 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 KLHL11Q9NVR0 708 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 EIF2B4Q9UI10 523 aaKnown RBP14.66□□□□□ -0.06
ABCF3-211ENST00000475728 ALG6Q9Y672 507 aa14.66□□□□□ -0.06
ABCF3-211ENST00000475728 TPRP12270 2363 aaKnown RBP14.66□□□□□ -0.06
ABCF3-211ENST00000475728 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.65□□□□□ -0.06
ABCF3-211ENST00000475728 PJA2O43164 708 aa14.65□□□□□ -0.06
ABCF3-211ENST00000475728 KRT1P04264 644 aa14.65□□□□□ -0.06
ABCF3-211ENST00000475728 MAOBP27338 520 aa14.65□□□□□ -0.06
ABCF3-211ENST00000475728 SUOXP51687 545 aa14.65□□□□□ -0.06
ABCF3-211ENST00000475728 AFF3P51826 1226 aaKnown RBP14.65□□□□□ -0.06
ABCF3-211ENST00000475728 METAP1P53582 386 aa14.65□□□□□ -0.06
ABCF3-211ENST00000475728 NAP1L1P55209 391 aaKnown RBP14.65□□□□□ -0.06
ABCF3-211ENST00000475728 IRX4P78413 519 aa14.65□□□□□ -0.06
ABCF3-211ENST00000475728 NSUN2Q08J23 767 aaKnown RBP eCLIP14.65□□□□□ -0.06
ABCF3-211ENST00000475728 KIF5AQ12840 1032 aa14.65□□□□□ -0.06
ABCF3-211ENST00000475728 ZNF235Q14590 738 aa14.65□□□□□ -0.06
ABCF3-211ENST00000475728 LBRQ14739 615 aaKnown RBP14.65□□□□□ -0.06
ABCF3-211ENST00000475728 ATXN7L2Q5T6C5 722 aaPredicted RBP14.65□□□□□ -0.06
ABCF3-211ENST00000475728 PIP5KL1Q5T9C9 394 aa14.65□□□□□ -0.06
ABCF3-211ENST00000475728 TIGD7Q6NT04 549 aaPredicted RBP14.65□□□□□ -0.06
ABCF3-211ENST00000475728 GDPD4Q6W3E5 623 aa14.65□□□□□ -0.06
ABCF3-211ENST00000475728 DAAM2Q86T65 1068 aa14.65□□□□□ -0.06
ABCF3-211ENST00000475728 PRPF39Q86UA1 669 aaKnown RBP14.65□□□□□ -0.06
ABCF3-211ENST00000475728 TRIM69Q86WT6 500 aa14.65□□□□□ -0.06
ABCF3-211ENST00000475728 TMEM139Q8IV31 216 aa14.65□□□□□ -0.06
ABCF3-211ENST00000475728 ZCCHC9Q8N567 271 aaKnown RBP14.65□□□□□ -0.06
ABCF3-211ENST00000475728 OR6K2Q8NGY2 324 aa14.65□□□□□ -0.06
ABCF3-211ENST00000475728 HCAR2Q8TDS4 363 aa14.65□□□□□ -0.06
ABCF3-211ENST00000475728 RAPGEF5Q92565 580 aa14.65□□□□□ -0.06
ABCF3-211ENST00000475728 RNF157Q96PX1 679 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms