RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 HCAR3P49019 387 aa24.41■■□□□ 1.5
CPNE1-223ENST00000475146 PAPOLAP51003 745 aaKnown RBP24.41■■□□□ 1.5
CPNE1-223ENST00000475146 SLC25A11Q02978 314 aaKnown RBP24.41■■□□□ 1.5
CPNE1-223ENST00000475146 DPYSQ14117 519 aa24.41■■□□□ 1.5
CPNE1-223ENST00000475146 HLA-BQ31612 363 aa24.41■■□□□ 1.5
CPNE1-223ENST00000475146 INO80DQ53TQ3 878 aaPredicted RBP24.41■■□□□ 1.5
CPNE1-223ENST00000475146 TXNRD3NBQ6F5E7 133 aa24.41■■□□□ 1.5
CPNE1-223ENST00000475146 FBXL19Q6PCT2 694 aa24.41■■□□□ 1.5
CPNE1-223ENST00000475146 TRIM69Q86WT6 500 aa24.41■■□□□ 1.5
CPNE1-223ENST00000475146 NPWQ8N729 165 aa24.41■■□□□ 1.5
CPNE1-223ENST00000475146 TEKT4Q8WW24 435 aa24.41■■□□□ 1.5
CPNE1-223ENST00000475146 SLC32A1Q9H598 525 aa24.41■■□□□ 1.5
CPNE1-223ENST00000475146 NHEJ1Q9H9Q4 299 aaPredicted RBP24.41■■□□□ 1.5
CPNE1-223ENST00000475146 IL21RQ9HBE5 538 aa24.41■■□□□ 1.5
CPNE1-223ENST00000475146 SNX11Q9Y5W9 270 aa24.41■■□□□ 1.5
CPNE1-223ENST00000475146 GIPC1O14908 333 aa24.4■■□□□ 1.5
CPNE1-223ENST00000475146 GJB3O75712 270 aa24.4■■□□□ 1.5
CPNE1-223ENST00000475146 POP4O95707 220 aaKnown RBP24.4■■□□□ 1.5
CPNE1-223ENST00000475146 GJC1P36383 396 aa24.4■■□□□ 1.5
CPNE1-223ENST00000475146 TBX2Q13207 712 aaPredicted RBP24.4■■□□□ 1.5
CPNE1-223ENST00000475146 KRT81Q14533 505 aa24.4■■□□□ 1.5
CPNE1-223ENST00000475146 HADHQ16836 314 aaKnown RBP24.4■■□□□ 1.5
CPNE1-223ENST00000475146 MYLK3Q32MK0 819 aa24.4■■□□□ 1.5
CPNE1-223ENST00000475146 NAPEPLDQ6IQ20 393 aa24.4■■□□□ 1.5
CPNE1-223ENST00000475146 PARS2Q7L3T8 475 aaKnown RBP24.4■■□□□ 1.5
CPNE1-223ENST00000475146 SKA1Q96BD8 255 aa24.4■■□□□ 1.5
CPNE1-223ENST00000475146 LRIG1Q96JA1 1093 aa24.4■■□□□ 1.5
CPNE1-223ENST00000475146 RBSNQ9H1K0 784 aa24.4■■□□□ 1.5
CPNE1-223ENST00000475146 SP110Q9HB58 689 aa24.4■■□□□ 1.5
CPNE1-223ENST00000475146 PDFQ9HBH1 243 aa24.4■■□□□ 1.5
CPNE1-223ENST00000475146 FNDC3AQ9Y2H6 1198 aaKnown RBP24.4■■□□□ 1.5
CPNE1-223ENST00000475146 SPTBN2O15020 2390 aa24.39■■□□□ 1.5
CPNE1-223ENST00000475146 A0A1W2PQU0 124 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 J3KR12 359 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 VILLO15195 856 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 PRAMEF11O60813 436 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 PCDH8O95206 1070 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 UGT2B4P06133 528 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 TMEM253P0C7T8 217 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 ADRB3P13945 408 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 CD38P28907 300 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 NUDT1P36639 197 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 RAD51Q06609 339 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 SETMARQ53H47 684 aaPredicted RBP24.39■■□□□ 1.49
CPNE1-223ENST00000475146 SLC45A4Q5BKX6 768 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 AFMIDQ63HM1 303 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 POLNQ7Z5Q5 900 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 ARHGAP12Q8IWW6 846 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 EXOC2Q96KP1 924 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 CSPG4P5Q96PW8 444 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 OSBPL1AQ9BXW6 950 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 PCDH18Q9HCL0 1135 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 LHX3Q9UBR4 397 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 DMTF1Q9Y222 760 aa24.39■■□□□ 1.49
CPNE1-223ENST00000475146 CNOT1A5YKK6 2376 aaKnown RBP24.39■■□□□ 1.49
CPNE1-223ENST00000475146 TMEM110-MUSTN1A8MSY1 372 aa24.38■■□□□ 1.49
CPNE1-223ENST00000475146 UPK3BL1B0FP48 263 aa24.38■■□□□ 1.49
CPNE1-223ENST00000475146 UPK3BL2E5RIL1 263 aa24.38■■□□□ 1.49
CPNE1-223ENST00000475146 WNT9AO14904 365 aa24.38■■□□□ 1.49
CPNE1-223ENST00000475146 PROSCO94903 275 aa24.38■■□□□ 1.49
CPNE1-223ENST00000475146 ADRB1P08588 477 aa24.38■■□□□ 1.49
CPNE1-223ENST00000475146 CEACAM1P13688 526 aa24.38■■□□□ 1.49
CPNE1-223ENST00000475146 CD59P13987 128 aa24.38■■□□□ 1.49
CPNE1-223ENST00000475146 AMPD1P23109 780 aa24.38■■□□□ 1.49
CPNE1-223ENST00000475146 CDH6P55285 790 aa24.38■■□□□ 1.49
CPNE1-223ENST00000475146 SLC14A1Q13336 389 aa24.38■■□□□ 1.49
CPNE1-223ENST00000475146 CYTH1Q15438 398 aa24.38■■□□□ 1.49
CPNE1-223ENST00000475146 ZNF805Q5CZA5 627 aa24.38■■□□□ 1.49
CPNE1-223ENST00000475146 N4BP2L1Q5TBK1 243 aaPredicted RBP24.38■■□□□ 1.49
CPNE1-223ENST00000475146 NEK5Q6P3R8 708 aa24.38■■□□□ 1.49
CPNE1-223ENST00000475146 TMCO3Q6UWJ1 677 aa24.38■■□□□ 1.49
CPNE1-223ENST00000475146 LZTR1Q8N653 840 aa24.38■■□□□ 1.49
CPNE1-223ENST00000475146 KLK6Q92876 244 aa24.38■■□□□ 1.49
CPNE1-223ENST00000475146 TM7SF3Q9NS93 570 aa24.38■■□□□ 1.49
CPNE1-223ENST00000475146 MFHAS1Q9Y4C4 1052 aa24.38■■□□□ 1.49
CPNE1-223ENST00000475146 WNT1P04628 370 aa24.37■■□□□ 1.49
CPNE1-223ENST00000475146 PRLRP16471 622 aa24.37■■□□□ 1.49
CPNE1-223ENST00000475146 PIP4P1Q86T03 277 aa24.37■■□□□ 1.49
CPNE1-223ENST00000475146 HORMAD1Q86X24 394 aa24.37■■□□□ 1.49
CPNE1-223ENST00000475146 CPNE8Q86YQ8 564 aa24.37■■□□□ 1.49
CPNE1-223ENST00000475146 KLHL32Q96NJ5 620 aa24.37■■□□□ 1.49
CPNE1-223ENST00000475146 LCMT1Q9UIC8 334 aa24.37■■□□□ 1.49
CPNE1-223ENST00000475146 LAMA1P25391 3075 aa24.37■■□□□ 1.49
CPNE1-223ENST00000475146 C16orf96A6NNT2 1141 aa24.36■■□□□ 1.49
CPNE1-223ENST00000475146 KCNK3O14649 394 aa24.36■■□□□ 1.49
CPNE1-223ENST00000475146 SLC31A1O15431 190 aa24.36■■□□□ 1.49
CPNE1-223ENST00000475146 PALMO75781 387 aa24.36■■□□□ 1.49
CPNE1-223ENST00000475146 CTSKP43235 329 aa24.36■■□□□ 1.49
CPNE1-223ENST00000475146 GDPD4Q6W3E5 623 aa24.36■■□□□ 1.49
CPNE1-223ENST00000475146 ARHGAP36Q6ZRI8 547 aa24.36■■□□□ 1.49
CPNE1-223ENST00000475146 MYOCQ99972 504 aa24.36■■□□□ 1.49
CPNE1-223ENST00000475146 ETNK2Q9NVF9 386 aa24.36■■□□□ 1.49
CPNE1-223ENST00000475146 IPO11Q9UI26 975 aaKnown RBP24.36■■□□□ 1.49
CPNE1-223ENST00000475146 FADS3Q9Y5Q0 445 aa24.36■■□□□ 1.49
CPNE1-223ENST00000475146 DNAH14Q0VDD8 3507 aa24.36■■□□□ 1.49
CPNE1-223ENST00000475146 A0A1W2PR77 199 aa24.35■■□□□ 1.49
CPNE1-223ENST00000475146 PRAMEF26H0Y7S4 382 aa24.35■■□□□ 1.49
CPNE1-223ENST00000475146 H0Y8X5 98 aa24.35■■□□□ 1.49
CPNE1-223ENST00000475146 INSIG1O15503 277 aa24.35■■□□□ 1.49
CPNE1-223ENST00000475146 SH3BP5O60239 455 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms