RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 IGSF6O95976 241 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 IL1BP01584 269 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 TNNT1P13805 278 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 ITGB7P26010 798 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 RGRP47804 291 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 RENBPP51606 427 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 METAP1P53582 386 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 RHOAP61586 193 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 GRM3Q14832 879 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 ARSIQ5FYB1 569 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 AGBL4Q5VU57 503 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 TIGD7Q6NT04 549 aaPredicted RBP17.18■□□□□ 0.34
SCAF11-206ENST00000474828 BZW1Q7L1Q6 419 aaKnown RBP17.18■□□□□ 0.34
SCAF11-206ENST00000474828 ZNF354CQ86Y25 554 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 PGBD5Q8N414 524 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 UBL4BQ8N7F7 174 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 TOE1Q96GM8 510 aaKnown RBP17.18■□□□□ 0.34
SCAF11-206ENST00000474828 ZNF830Q96NB3 372 aaPredicted RBP17.18■□□□□ 0.34
SCAF11-206ENST00000474828 TUBGCP5Q96RT8 1024 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 IL12RB2Q99665 862 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 OSBPL8Q9BZF1 889 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 TM6SF2Q9BZW4 377 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 LZTFL1Q9NQ48 299 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 FBXL12Q9NXK8 326 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 DKK3Q9UBP4 350 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 PCDHGA5Q9Y5G8 931 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 GPR179Q6PRD1 2367 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 OTOGLQ3ZCN5 2332 aa17.18■□□□□ 0.34
SCAF11-206ENST00000474828 APOC4-APOC2K7ER74 178 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 RHOBTB1O94844 696 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 EPN2O95208 641 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 APOC2P02655 101 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 ACSL1P33121 698 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 MAPK8P45983 427 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 PSMD8P48556 350 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 IFI35P80217 286 aaPredicted RBP17.17■□□□□ 0.34
SCAF11-206ENST00000474828 KLF1Q13351 362 aaPredicted RBP17.17■□□□□ 0.34
SCAF11-206ENST00000474828 PDK1Q15118 436 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 PRKD1Q15139 912 aaPredicted RBP17.17■□□□□ 0.34
SCAF11-206ENST00000474828 ODF2Q5BJF6 829 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 ATXN7L2Q5T6C5 722 aaPredicted RBP17.17■□□□□ 0.34
SCAF11-206ENST00000474828 PIP5KL1Q5T9C9 394 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 RFX6Q8HWS3 928 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.17■□□□□ 0.34
SCAF11-206ENST00000474828 DNASE2BQ8WZ79 361 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 ARRDC3Q96B67 414 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 ECHDC3Q96DC8 303 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 NSMCE3Q96MG7 304 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 BTBD1Q9H0C5 482 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 NEUROG2Q9H2A3 272 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 KCND1Q9NSA2 647 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 INVSQ9Y283 1065 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 NCKAP1Q9Y2A7 1128 aa17.17■□□□□ 0.34
SCAF11-206ENST00000474828 A0A1W2PP55 124 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 ZSCAN12O43309 604 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 PLRG1O43660 514 aaKnown RBP17.16■□□□□ 0.34
SCAF11-206ENST00000474828 AP1G1O43747 822 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 RETP07949 1114 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 PECAM1P16284 738 aaPredicted RBP17.16■□□□□ 0.34
SCAF11-206ENST00000474828 HOXD12P35452 270 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 ADPRHP54922 357 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 TAS2R38P59533 333 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 AP1S1P61966 158 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 CNTN1Q12860 1018 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 XRCC4Q13426 336 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 ELF2Q15723 593 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 ZNF805Q5CZA5 627 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 MARC1Q5VT66 337 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 NPNTQ6UXI9 565 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 CEP68Q76N32 757 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 LPCAT2Q7L5N7 544 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 ASCL5Q7RTU5 278 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 SRLQ86TD4 932 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 SLC41A1Q8IVJ1 513 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 CCDC13Q8IYE1 715 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 HDDC3Q8N4P3 179 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 ZNF641Q96N77 438 aaPredicted RBP17.16■□□□□ 0.34
SCAF11-206ENST00000474828 NUDCD1Q96RS6 583 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 CARD9Q9H257 536 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 TPX2Q9ULW0 747 aaKnown RBP17.16■□□□□ 0.34
SCAF11-206ENST00000474828 PACSIN2Q9UNF0 486 aaPredicted RBP17.16■□□□□ 0.34
SCAF11-206ENST00000474828 ATP8A1Q9Y2Q0 1164 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 HEY1Q9Y5J3 304 aa17.16■□□□□ 0.34
SCAF11-206ENST00000474828 TNRC6BQ9UPQ9 1833 aaKnown RBP17.16■□□□□ 0.34
SCAF11-206ENST00000474828 ZFHX2Q9C0A1 2572 aaPredicted RBP17.16■□□□□ 0.34
SCAF11-206ENST00000474828 METTL12A8MUP2 240 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 TRAFD1O14545 582 aaPredicted RBP17.15■□□□□ 0.34
SCAF11-206ENST00000474828 PPP1R12AO14974 1030 aaPredicted RBP17.15■□□□□ 0.34
SCAF11-206ENST00000474828 LRP3O75074 770 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 MAP3K6O95382 1288 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 PTMAP06454 111 aaKnown RBP17.15■□□□□ 0.34
SCAF11-206ENST00000474828 CCNB1P14635 433 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 TGM1P22735 817 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 CES1P23141 567 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 MMP13P45452 471 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 DNA2P51530 1060 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 RAD51Q06609 339 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 CCDC15Q0P6D6 951 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 NOMO1Q15155 1222 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 PLA2G2CQ5R387 149 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms