RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ZNF397Q8NF99 534 aaPredicted RBP14.26□□□□□ -0.13
CCDC78-209ENST00000474647 HEPHQ9BQS7 1158 aa14.26□□□□□ -0.13
CCDC78-209ENST00000474647 TM6SF2Q9BZW4 377 aa14.26□□□□□ -0.13
CCDC78-209ENST00000474647 GPR27Q9NS67 375 aa14.26□□□□□ -0.13
CCDC78-209ENST00000474647 KLF15Q9UIH9 416 aa14.26□□□□□ -0.13
CCDC78-209ENST00000474647 FADS3Q9Y5Q0 445 aa14.26□□□□□ -0.13
CCDC78-209ENST00000474647 IGLON5A6NGN9 336 aa14.25□□□□□ -0.13
CCDC78-209ENST00000474647 DRGXA6NNA5 263 aa14.25□□□□□ -0.13
CCDC78-209ENST00000474647 MUSKO15146 869 aa14.25□□□□□ -0.13
CCDC78-209ENST00000474647 ZNF821O75541 412 aaPredicted RBP14.25□□□□□ -0.13
CCDC78-209ENST00000474647 NR0B2Q15466 257 aa14.25□□□□□ -0.13
CCDC78-209ENST00000474647 CARD16Q5EG05 197 aa14.25□□□□□ -0.13
CCDC78-209ENST00000474647 TPRG1LQ5T0D9 272 aa14.25□□□□□ -0.13
CCDC78-209ENST00000474647 KIAA1614Q5VZ46 1190 aa14.25□□□□□ -0.13
CCDC78-209ENST00000474647 RBM44Q6ZP01 1051 aaKnown RBP14.25□□□□□ -0.13
CCDC78-209ENST00000474647 ZDHHC17Q8IUH5 632 aa14.25□□□□□ -0.13
CCDC78-209ENST00000474647 ELOA2Q8IYF1 753 aaPredicted RBP14.25□□□□□ -0.13
CCDC78-209ENST00000474647 OR6K2Q8NGY2 324 aa14.25□□□□□ -0.13
CCDC78-209ENST00000474647 CEP44Q9C0F1 390 aa14.25□□□□□ -0.13
CCDC78-209ENST00000474647 NCKIPSDQ9NZQ3 722 aa14.25□□□□□ -0.13
CCDC78-209ENST00000474647 APOBEC3BQ9UH17 382 aaKnown RBP14.25□□□□□ -0.13
CCDC78-209ENST00000474647 GGT7Q9UJ14 662 aa14.25□□□□□ -0.13
CCDC78-209ENST00000474647 DNAJC12Q9UKB3 198 aa14.25□□□□□ -0.13
CCDC78-209ENST00000474647 ITM2BQ9Y287 266 aa14.25□□□□□ -0.13
CCDC78-209ENST00000474647 ENTPD2Q9Y5L3 495 aa14.25□□□□□ -0.13
CCDC78-209ENST00000474647 ACTL7AQ9Y615 435 aa14.25□□□□□ -0.13
CCDC78-209ENST00000474647 IGLV3-10A0A075B6K4 115 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 A0A1W2PNU3 283 aaPredicted RBP14.24□□□□□ -0.13
CCDC78-209ENST00000474647 ILVBLA1L0T0 632 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 PMS2P1A4D2B8 440 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 GOLGA8SH3BPF8 625 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 SPINT1O43278 529 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 AP1G1O43747 822 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 F9P00740 461 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 PON1P27169 355 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 GKP32189 559 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 CLCN1P35523 988 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 ABL2P42684 1182 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 THOP1P52888 689 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 ARF5P84085 180 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 C1orf61Q13536 156 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 PRRT3Q5FWE3 981 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 PERM1Q5SV97 790 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 TTC9Q92623 222 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 CCDC97Q96F63 343 aaPredicted RBP14.24□□□□□ -0.13
CCDC78-209ENST00000474647 WBP1Q96G27 269 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 GBP4Q96PP9 640 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 ZYG11BQ9C0D3 744 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 TCEAL2Q9H3H9 227 aaPredicted RBP14.24□□□□□ -0.13
CCDC78-209ENST00000474647 HECAQ9UBI9 543 aaPredicted RBP14.24□□□□□ -0.13
CCDC78-209ENST00000474647 CSNK1G3Q9Y6M4 447 aa14.24□□□□□ -0.13
CCDC78-209ENST00000474647 ARHGEF17Q96PE2 2063 aaPredicted RBP14.24□□□□□ -0.13
CCDC78-209ENST00000474647 EME2A4GXA9 379 aaPredicted RBP14.23□□□□□ -0.13
CCDC78-209ENST00000474647 CASC3O15234 703 aaKnown RBP14.23□□□□□ -0.13
CCDC78-209ENST00000474647 LZTS3O60299 673 aaPredicted RBP14.23□□□□□ -0.13
CCDC78-209ENST00000474647 ZMPSTE24O75844 475 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 KRT10P13645 584 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 MTIF2P46199 727 aaKnown RBP14.23□□□□□ -0.13
CCDC78-209ENST00000474647 GNA12Q03113 381 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 EIF2B5Q13144 721 aaKnown RBP14.23□□□□□ -0.13
CCDC78-209ENST00000474647 ZSCAN23Q3MJ62 389 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 SLC25A52Q3SY17 297 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 C2CD6Q53TS8 623 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 LRRC73Q5JTD7 316 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 ZNF783Q6ZMS7 281 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 CCDC81Q6ZN84 652 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 VPS36Q86VN1 386 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 FAM131BQ86XD5 332 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 PHACTR4Q8IZ21 702 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 ARL14Q8N4G2 192 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 TMEM35BQ8NCS4 154 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 BTN2A2Q8WVV5 523 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 GLMNQ92990 594 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 NT5C3BQ969T7 300 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 PGAP3Q96FM1 320 aaPredicted RBP14.23□□□□□ -0.13
CCDC78-209ENST00000474647 C1orf74Q96LT6 269 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 CFAP57Q96MR6 1250 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 SLC46A1Q96NT5 459 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 KLF6Q99612 283 aaPredicted RBP14.23□□□□□ -0.13
CCDC78-209ENST00000474647 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.23□□□□□ -0.13
CCDC78-209ENST00000474647 SPASTQ9UBP0 616 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 SALL4Q9UJQ4 1053 aa14.23□□□□□ -0.13
CCDC78-209ENST00000474647 ZFC3H1O60293 1989 aaKnown RBP14.22□□□□□ -0.13
CCDC78-209ENST00000474647 C16orf96A6NNT2 1141 aa14.22□□□□□ -0.13
CCDC78-209ENST00000474647 FOXN3O00409 490 aaPredicted RBP14.22□□□□□ -0.13
CCDC78-209ENST00000474647 KRIT1O00522 736 aa14.22□□□□□ -0.13
CCDC78-209ENST00000474647 TSPAN6O43657 245 aa14.22□□□□□ -0.13
CCDC78-209ENST00000474647 TCEA3O75764 348 aa14.22□□□□□ -0.13
CCDC78-209ENST00000474647 TNFSF15O95150 251 aa14.22□□□□□ -0.13
CCDC78-209ENST00000474647 ANXA6P08133 673 aa14.22□□□□□ -0.13
CCDC78-209ENST00000474647 C6P13671 934 aa14.22□□□□□ -0.13
CCDC78-209ENST00000474647 FLT3P36888 993 aa14.22□□□□□ -0.13
CCDC78-209ENST00000474647 ACVRL1P37023 503 aa14.22□□□□□ -0.13
CCDC78-209ENST00000474647 RPIAP49247 311 aa14.22□□□□□ -0.13
CCDC78-209ENST00000474647 ADKP55263 362 aaKnown RBP14.22□□□□□ -0.13
CCDC78-209ENST00000474647 SLC20A2Q08357 652 aa14.22□□□□□ -0.13
CCDC78-209ENST00000474647 RAPGEF1Q13905 1077 aa14.22□□□□□ -0.13
CCDC78-209ENST00000474647 SPIDRQ14159 915 aa14.22□□□□□ -0.13
CCDC78-209ENST00000474647 PTK2BQ14289 1009 aa14.22□□□□□ -0.13
CCDC78-209ENST00000474647 TCEA2Q15560 299 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms