RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 TMPRSS7Q7RTY8 843 aa15.41■□□□□ 0.06
VARS-223ENST00000474643 BNIPLQ7Z465 357 aa15.41■□□□□ 0.06
VARS-223ENST00000474643 SLFN11Q7Z7L1 901 aa15.41■□□□□ 0.06
VARS-223ENST00000474643 PCDH20Q8N6Y1 951 aaKnown RBP15.41■□□□□ 0.06
VARS-223ENST00000474643 CHST14Q8NCH0 376 aa15.41■□□□□ 0.06
VARS-223ENST00000474643 CENPIQ92674 756 aaPredicted RBP15.41■□□□□ 0.06
VARS-223ENST00000474643 TBC1D31Q96DN5 1066 aa15.41■□□□□ 0.06
VARS-223ENST00000474643 CALN1Q9BXU9 219 aa15.41■□□□□ 0.06
VARS-223ENST00000474643 CEP44Q9C0F1 390 aa15.41■□□□□ 0.06
VARS-223ENST00000474643 THAP2Q9H0W7 228 aa15.41■□□□□ 0.06
VARS-223ENST00000474643 ERVMER34-1Q9H9K5 563 aa15.41■□□□□ 0.06
VARS-223ENST00000474643 PPARGC1AQ9UBK2 798 aaKnown RBP15.41■□□□□ 0.06
VARS-223ENST00000474643 DNAI1Q9UI46 699 aa15.41■□□□□ 0.06
VARS-223ENST00000474643 DOCK4Q8N1I0 1966 aa15.41■□□□□ 0.06
VARS-223ENST00000474643 SPEGQ15772 3267 aa15.41■□□□□ 0.06
VARS-223ENST00000474643 SSU72P8A0A1W2PR75 194 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 FAM149AA5PLN7 773 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 RAMP2O60895 175 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 SDC3O75056 442 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 LEFTY1O75610 366 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 RFPL3O75679 317 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 CTSLP07711 333 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 THEGLP0DJG4 465 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 JUPP14923 745 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 SLC18A3Q16572 532 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 PIP5KL1Q5T9C9 394 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 DPY19L3Q6ZPD9 716 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 PTAR1Q7Z6K3 402 aaPredicted RBP15.4■□□□□ 0.06
VARS-223ENST00000474643 HORMAD1Q86X24 394 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 PROSER1Q86XN7 944 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 ZNF683Q8IZ20 524 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 CCDC185Q8N715 623 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 MDM1Q8TC05 714 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 SAP25Q8TEE9 199 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 CTNNBL1Q8WYA6 563 aaPredicted RBP15.4■□□□□ 0.06
VARS-223ENST00000474643 HEPHQ9BQS7 1158 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 TM6SF2Q9BZW4 377 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 FZD3Q9NPG1 666 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 TOR4AQ9NXH8 423 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 RALYQ9UKM9 306 aaKnown RBP15.4■□□□□ 0.06
VARS-223ENST00000474643 LHX6Q9UPM6 363 aa15.4■□□□□ 0.06
VARS-223ENST00000474643 KNL1Q8NG31 2342 aa15.39■□□□□ 0.05
VARS-223ENST00000474643 TMEM191CA6NGB0 347 aa15.39■□□□□ 0.05
VARS-223ENST00000474643 GOLGA6L6A8MZA4 724 aa15.39■□□□□ 0.05
VARS-223ENST00000474643 I6L893 689 aaPredicted RBP15.39■□□□□ 0.05
VARS-223ENST00000474643 ALPPL2P10696 532 aa15.39■□□□□ 0.05
VARS-223ENST00000474643 HNRNPA2B1P22626 353 aaKnown RBP15.39■□□□□ 0.05
VARS-223ENST00000474643 MAPKAPK2P49137 400 aa15.39■□□□□ 0.05
VARS-223ENST00000474643 CCNHP51946 323 aaPredicted RBP15.39■□□□□ 0.05
VARS-223ENST00000474643 DAB2P98082 770 aa15.39■□□□□ 0.05
VARS-223ENST00000474643 OGDHQ02218 1023 aa15.39■□□□□ 0.05
VARS-223ENST00000474643 DNAJC3Q13217 504 aa15.39■□□□□ 0.05
VARS-223ENST00000474643 CARD16Q5EG05 197 aa15.39■□□□□ 0.05
VARS-223ENST00000474643 NTAN1Q96AB6 310 aa15.39■□□□□ 0.05
VARS-223ENST00000474643 ARRDC3Q96B67 414 aa15.39■□□□□ 0.05
VARS-223ENST00000474643 CHP1Q99653 195 aa15.39■□□□□ 0.05
VARS-223ENST00000474643 NUP85Q9BW27 656 aa15.39■□□□□ 0.05
VARS-223ENST00000474643 HDAC8Q9BY41 377 aa15.39■□□□□ 0.05
VARS-223ENST00000474643 OSBPL2Q9H1P3 480 aa15.39■□□□□ 0.05
VARS-223ENST00000474643 NHEJ1Q9H9Q4 299 aaPredicted RBP15.39■□□□□ 0.05
VARS-223ENST00000474643 HECAQ9UBI9 543 aaPredicted RBP15.39■□□□□ 0.05
VARS-223ENST00000474643 IPO11Q9UI26 975 aaKnown RBP15.39■□□□□ 0.05
VARS-223ENST00000474643 CA5BQ9Y2D0 317 aa15.39■□□□□ 0.05
VARS-223ENST00000474643 FCF1Q9Y324 198 aaKnown RBP15.39■□□□□ 0.05
VARS-223ENST00000474643 TP53BP1Q12888 1972 aaPredicted RBP15.38■□□□□ 0.05
VARS-223ENST00000474643 KRIT1O00522 736 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 PRPSAP2O60256 369 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 C1SP09871 688 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 RHOQP17081 205 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 ITGB7P26010 798 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 SSR1P43307 286 aaKnown RBP15.38■□□□□ 0.05
VARS-223ENST00000474643 SNRPD1P62314 119 aaKnown RBP15.38■□□□□ 0.05
VARS-223ENST00000474643 RPS21P63220 83 aaKnown RBP15.38■□□□□ 0.05
VARS-223ENST00000474643 BNIP3Q12983 259 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 SGCGQ13326 291 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 KIAA1161Q6NSJ0 714 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 PDCD7Q8N8D1 485 aaKnown RBP15.38■□□□□ 0.05
VARS-223ENST00000474643 FNIP1Q8TF40 1166 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 FAM131CQ96AQ9 280 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 FEM1CQ96JP0 617 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 EPAS1Q99814 870 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 NCAPGQ9BPX3 1015 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 TRIM7Q9C029 511 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 MAGEH1Q9H213 219 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 RETREG1Q9H6L5 497 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 EVA1BQ9NVM1 165 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 CTTNBP2NLQ9P2B4 639 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 PCSK1NQ9UHG2 260 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 ANAPC7Q9UJX3 599 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 PCDHGA1Q9Y5H4 931 aa15.38■□□□□ 0.05
VARS-223ENST00000474643 CHD6Q8TD26 2715 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 CABIN1Q9Y6J0 2220 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 A6NNZ2 444 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 BUB1O43683 1085 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 CREB3O43889 395 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 H2AFZP0C0S5 128 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 ADRB3P13945 408 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 EPHB2P29323 1055 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 L1CAMP32004 1257 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 ACVRL1P37023 503 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms