RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 LRIG1Q96JA1 1093 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 TSGA13Q96PP4 275 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 PHOX2BQ99453 314 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 GPR174Q9BXC1 333 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 OSBPL8Q9BZF1 889 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 NEUROG2Q9H2A3 272 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 HAUS2Q9NVX0 235 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 TRMT1Q9NXH9 659 aaKnown RBP12.6□□□□□ -0.39
DDX56-209ENST00000473924 WSB2Q9NYS7 404 aaPredicted RBP12.6□□□□□ -0.39
DDX56-209ENST00000473924 EVLQ9UI08 416 aaPredicted RBP12.6□□□□□ -0.39
DDX56-209ENST00000473924 MBD1Q9UIS9 605 aaPredicted RBP12.6□□□□□ -0.39
DDX56-209ENST00000473924 WASF2Q9Y6W5 498 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 FAM47DPA6NHR8 397 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 PROB1E7EW31 1015 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 MATN3O15232 486 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 DDX3YO15523 660 aaKnown RBP12.59□□□□□ -0.39
DDX56-209ENST00000473924 TJP3O95049 919 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 IGLV3-19P01714 112 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 C7P10643 843 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 ACSL1P33121 698 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 HSPA9P38646 679 aaKnown RBP12.59□□□□□ -0.39
DDX56-209ENST00000473924 DHPSP49366 369 aaPredicted RBP12.59□□□□□ -0.39
DDX56-209ENST00000473924 METAP1P53582 386 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 ITKQ08881 620 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 HNRNPDQ14103 355 aaKnown RBP12.59□□□□□ -0.39
DDX56-209ENST00000473924 RPS6KA1Q15418 735 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 MEI1Q5TIA1 1274 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 PMS2CLQ68D20 193 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 LAIR1Q6GTX8 287 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 GDPD4Q6W3E5 623 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 BBS12Q6ZW61 710 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 ARMCX6Q7L4S7 300 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 CCDC13Q8IYE1 715 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 AADATQ8N5Z0 425 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 DEFB119Q8N690 84 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 PAF1Q8N7H5 531 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 LRRN4Q8WUT4 740 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 HAUS1Q96CS2 278 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 ZC3H10Q96K80 434 aaKnown RBP12.59□□□□□ -0.39
DDX56-209ENST00000473924 PSKH2Q96QS6 385 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 LGMNQ99538 433 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 HINFPQ9BQA5 517 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 OSBPL1AQ9BXW6 950 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 DUSP15Q9H1R2 295 aaPredicted RBP12.59□□□□□ -0.39
DDX56-209ENST00000473924 SGK2Q9HBY8 427 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 SAE1Q9UBE0 346 aaPredicted RBP12.59□□□□□ -0.39
DDX56-209ENST00000473924 SERGEFQ9UGK8 458 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 GMEB2Q9UKD1 530 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 FZD4Q9ULV1 537 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 EFR3BQ9Y2G0 817 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 SHROOM3Q8TF72 1996 aa12.59□□□□□ -0.39
DDX56-209ENST00000473924 GOLGA6L9A6NEM1 432 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 LRRC72A6NJI9 287 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 APOC4-APOC2K7ER74 178 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 PLK4O00444 970 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 SEMA4FO95754 770 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 PEX11BO96011 259 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 APOC2P02655 101 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 UGT2B4P06133 528 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 CCNB1P14635 433 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 PECAM1P16284 738 aaPredicted RBP12.58□□□□□ -0.4
DDX56-209ENST00000473924 PTPN7P35236 360 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 DRD3P35462 400 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 MAPK8P45983 427 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 SCNN1BP51168 640 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 ADCY2Q08462 1091 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 PPIDQ08752 370 aaKnown RBP12.58□□□□□ -0.4
DDX56-209ENST00000473924 NSUN2Q08J23 767 aaKnown RBP eCLIP12.58□□□□□ -0.4
DDX56-209ENST00000473924 CNTN1Q12860 1018 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 GRM3Q14832 879 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 SPDYCQ5MJ68 293 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 CFAP58Q5T655 872 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 SEL1L2Q5TEA6 688 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 AADACL2Q6P093 401 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 FBXL19Q6PCT2 694 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 SRLQ86TD4 932 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 ZC3H18Q86VM9 953 aaKnown RBP12.58□□□□□ -0.4
DDX56-209ENST00000473924 REXO1L1PQ8IX06 675 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 SUMF1Q8NBK3 374 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 OR14C36Q8NHC7 312 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 TFB1MQ8WVM0 346 aaKnown RBP12.58□□□□□ -0.4
DDX56-209ENST00000473924 FOXJ1Q92949 421 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 FAM122AQ96E09 287 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 KLHL32Q96NJ5 620 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 OLFM3Q96PB7 478 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 CPEB1Q9BZB8 566 aaKnown RBP12.58□□□□□ -0.4
DDX56-209ENST00000473924 BRD8Q9H0E9 1235 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 ATP13A3Q9H7F0 1226 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 NT5MQ9NPB1 228 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 SCUBE2Q9NQ36 999 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 RBM22Q9NW64 420 aaKnown RBP eCLIP12.58□□□□□ -0.4
DDX56-209ENST00000473924 SEPT10Q9P0V9 454 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 NCDNQ9UBB6 729 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 TTLL3Q9Y4R7 772 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 PLXND1Q9Y4D7 1925 aa12.58□□□□□ -0.4
DDX56-209ENST00000473924 TBC1D3DA0A087WVF3 549 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 TBC1D3IA0A087WXS9 549 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 TBC1D3EA0A087X179 549 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 TBC1D3KA0A087X1G2 549 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 TBC1D3FA6NER0 549 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms