RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 CCR5P51681 352 aa19.23■□□□□ 0.67
PTCD3-210ENST00000473829 PUM1Q14671 1186 aaKnown RBP eCLIP19.23■□□□□ 0.67
PTCD3-210ENST00000473829 MYLK3Q32MK0 819 aa19.23■□□□□ 0.67
PTCD3-210ENST00000473829 RAD9BQ6WBX8 426 aa19.23■□□□□ 0.67
PTCD3-210ENST00000473829 ERN2Q76MJ5 926 aaKnown RBP19.23■□□□□ 0.67
PTCD3-210ENST00000473829 PARS2Q7L3T8 475 aaKnown RBP19.23■□□□□ 0.67
PTCD3-210ENST00000473829 GDAP1L1Q96MZ0 367 aa19.23■□□□□ 0.67
PTCD3-210ENST00000473829 HDAC8Q9BY41 377 aa19.23■□□□□ 0.67
PTCD3-210ENST00000473829 TM9SF3Q9HD45 589 aa19.23■□□□□ 0.67
PTCD3-210ENST00000473829 TMEM9BQ9NQ34 198 aa19.23■□□□□ 0.67
PTCD3-210ENST00000473829 RCOR3Q9P2K3 495 aaPredicted RBP19.23■□□□□ 0.67
PTCD3-210ENST00000473829 HYOU1Q9Y4L1 999 aa19.23■□□□□ 0.67
PTCD3-210ENST00000473829 PCDHA13Q9Y5I0 950 aa19.23■□□□□ 0.67
PTCD3-210ENST00000473829 TMEM131Q92545 1883 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 TBC1D3DA0A087WVF3 549 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 TBC1D3IA0A087WXS9 549 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 TBC1D3EA0A087X179 549 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 TBC1D3KA0A087X1G2 549 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 A0A1W2PPC4 97 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 TBC1D3FA6NER0 549 aaPredicted RBP19.22■□□□□ 0.67
PTCD3-210ENST00000473829 TBC1D3LB9A6J9 549 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 INSIG1O15503 277 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 LATO43561 262 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 NDUFA10O95299 355 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 TBC1D3HP0C7X1 549 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 ITGB7P26010 798 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 ARHGAP25P42331 645 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 RGRP47804 291 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 GRIK2Q13002 908 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 TBC1D3GQ6DHY5 549 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 TBC1D3CQ6IPX1 549 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 TMEM139Q8IV31 216 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 TBC1D3Q8IZP1 549 aaPredicted RBP19.22■□□□□ 0.67
PTCD3-210ENST00000473829 LZTR1Q8N653 840 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 SPC24Q8NBT2 197 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 PCDH19Q8TAB3 1148 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 SLC6A18Q96N87 628 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 RTKNQ9BST9 563 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 GTPBP2Q9BX10 602 aaKnown RBP19.22■□□□□ 0.67
PTCD3-210ENST00000473829 CALN1Q9BXU9 219 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 KDM4CQ9H3R0 1056 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 SP110Q9HB58 689 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 DYRK4Q9NR20 520 aa19.22■□□□□ 0.67
PTCD3-210ENST00000473829 IPO11Q9UI26 975 aaKnown RBP19.22■□□□□ 0.67
PTCD3-210ENST00000473829 REXO2Q9Y3B8 237 aaKnown RBP19.22■□□□□ 0.67
PTCD3-210ENST00000473829 ANKRD36A6QL64 1941 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 DCDC2BA2VCK2 349 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 RCCD1A6NED2 376 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 ARHGAP33O14559 1287 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 TM4SF5O14894 197 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 WNT9AO14904 365 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 MFSD11O43934 449 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 IGSF6O95976 241 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 UGT2B4P06133 528 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 KRT7P08729 469 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 ADRB3P13945 408 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 MAT2AP31153 395 aaKnown RBP19.21■□□□□ 0.67
PTCD3-210ENST00000473829 CYLC1P35663 651 aaPredicted RBP19.21■□□□□ 0.67
PTCD3-210ENST00000473829 ABL2P42684 1182 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 CSNK1EP49674 416 aaKnown RBP19.21■□□□□ 0.67
PTCD3-210ENST00000473829 NEK3P51956 506 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 IL10RBQ08334 325 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 NCBP2-AS2Q69YL0 99 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 KCTD6Q8NC69 237 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 RAPGEF5Q92565 580 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 FAF2Q96CS3 445 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 PPP1R16AQ96I34 528 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 ZNF670Q9BS34 389 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 GOLPH3Q9H4A6 298 aa19.21■□□□□ 0.67
PTCD3-210ENST00000473829 EPN1Q9Y6I3 576 aaPredicted RBP19.21■□□□□ 0.67
PTCD3-210ENST00000473829 ASCC3Q8N3C0 2202 aaKnown RBP19.2■□□□□ 0.66
PTCD3-210ENST00000473829 A0A1B0GVT2 93 aa19.2■□□□□ 0.66
PTCD3-210ENST00000473829 MUSKO15146 869 aa19.2■□□□□ 0.66
PTCD3-210ENST00000473829 SPINT1O43278 529 aa19.2■□□□□ 0.66
PTCD3-210ENST00000473829 GJB3O75712 270 aa19.2■□□□□ 0.66
PTCD3-210ENST00000473829 PIGNO95427 931 aa19.2■□□□□ 0.66
PTCD3-210ENST00000473829 POP4O95707 220 aaKnown RBP19.2■□□□□ 0.66
PTCD3-210ENST00000473829 PEX11BO96011 259 aa19.2■□□□□ 0.66
PTCD3-210ENST00000473829 SDHBP21912 280 aa19.2■□□□□ 0.66
PTCD3-210ENST00000473829 HADHBP55084 474 aaKnown RBP19.2■□□□□ 0.66
PTCD3-210ENST00000473829 PDK2Q15119 407 aa19.2■□□□□ 0.66
PTCD3-210ENST00000473829 SPA17Q15506 151 aa19.2■□□□□ 0.66
PTCD3-210ENST00000473829 ANKRD20A8PQ5CZ79 823 aa19.2■□□□□ 0.66
PTCD3-210ENST00000473829 ZNF805Q5CZA5 627 aa19.2■□□□□ 0.66
PTCD3-210ENST00000473829 TRIM69Q86WT6 500 aa19.2■□□□□ 0.66
PTCD3-210ENST00000473829 TMTC1Q8IUR5 882 aa19.2■□□□□ 0.66
PTCD3-210ENST00000473829 MINDY1Q8N5J2 469 aa19.2■□□□□ 0.66
PTCD3-210ENST00000473829 PQLC3Q8N755 202 aa19.2■□□□□ 0.66
PTCD3-210ENST00000473829 TSEN2Q8NCE0 465 aaKnown RBP19.2■□□□□ 0.66
PTCD3-210ENST00000473829 LRIG1Q96JA1 1093 aa19.2■□□□□ 0.66
PTCD3-210ENST00000473829 KLHL32Q96NJ5 620 aa19.2■□□□□ 0.66
PTCD3-210ENST00000473829 PREBQ9HCU5 417 aa19.2■□□□□ 0.66
PTCD3-210ENST00000473829 SALL4Q9UJQ4 1053 aa19.2■□□□□ 0.66
PTCD3-210ENST00000473829 C3orf70A6NLC5 250 aaPredicted RBP19.19■□□□□ 0.66
PTCD3-210ENST00000473829 C16orf96A6NNT2 1141 aa19.19■□□□□ 0.66
PTCD3-210ENST00000473829 BUB1BO60566 1050 aaPredicted RBP19.19■□□□□ 0.66
PTCD3-210ENST00000473829 MAFKO60675 156 aa19.19■□□□□ 0.66
PTCD3-210ENST00000473829 RNGTTO60942 597 aaKnown RBP19.19■□□□□ 0.66
PTCD3-210ENST00000473829 PALMO75781 387 aa19.19■□□□□ 0.66
PTCD3-210ENST00000473829 MAP3K6O95382 1288 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms