RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 WDR55Q9H6Y2 383 aaPredicted RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 FAIMQ9NVQ4 179 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 RALGAPA2Q2PPJ7 1873 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 SOWAHBA6NEL2 793 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 TRIM64CA6NLI5 447 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 C9IYK1 514 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 DCLK1O15075 740 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 GPIP06744 558 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 HOXB6P17509 224 aaKnown RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 ARF4P18085 180 aaPredicted RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 FASP25445 335 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 CD151P48509 253 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 CLCN5P51795 746 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 GJA9P57773 515 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 DGKDQ16760 1214 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 SLC44A4Q53GD3 710 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 TMTC4Q5T4D3 741 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 PKN3Q6P5Z2 889 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 NAPRTQ6XQN6 538 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 ERMP1Q7Z2K6 904 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 AMIGO2Q86SJ2 522 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 FAM131BQ86XD5 332 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 HERC6Q8IVU3 1022 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 PLD6Q8N2A8 252 aaKnown RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 CCNYL1Q8N7R7 359 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 SMYD1Q8NB12 490 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 USP13Q92995 863 aaPredicted RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 ABTB1Q969K4 478 aaPredicted RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 ITPKCQ96DU7 683 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 THAP11Q96EK4 314 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 TSGA13Q96PP4 275 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 CYP2S1Q96SQ9 504 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 NPY6RQ99463 290 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 MEAF6Q9HAF1 191 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 ENTPD7Q9NQZ7 604 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 TMEM45AQ9NWC5 275 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 GDAP2Q9NXN4 497 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 LMCD1Q9NZU5 365 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 CDH7Q9ULB5 785 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 SNX13Q9Y5W8 968 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 KAT6AQ92794 2004 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 A0A087WZ62 844 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 TCAF2A6NFQ2 919 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 M0QYT0 321 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 MYF6P23409 242 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 ADORA2BP29275 332 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 SLC5A2P31639 672 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 IREB2P48200 963 aaKnown RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 TAF6P49848 677 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 GALNT2Q10471 571 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 FSTL1Q12841 308 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 DGKZQ13574 1117 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 GRM3Q14832 879 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 AMHR2Q16671 573 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 LY6KQ17RY6 165 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 DCAF6Q58WW2 860 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 FBXO47Q5MNV8 452 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 NBPF12Q5TAG4 269 aaPredicted RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 KCTD11Q693B1 232 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 REP15Q6BDI9 236 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 SLC27A1Q6PCB7 646 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 MAMDC4Q6UXC1 1216 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 GALNT7Q86SF2 657 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 TRIM74Q86UV6 250 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 TRIM73Q86UV7 250 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 PELI3Q8N2H9 469 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 FSTL5Q8N475 847 aaPredicted RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 TOP6BLQ8N6T0 577 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 C12orf29Q8N999 325 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 DDHD1Q8NEL9 900 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 SEPT8Q92599 483 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 NT5C3BQ969T7 300 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 FEM1CQ96JP0 617 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 FCRL3Q96P31 734 aaPredicted RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 PLEKHG4BQ96PX9 1271 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 SLC2A13Q96QE2 648 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 HNRNPABQ99729 332 aaKnown RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 MRPL45Q9BRJ2 306 aaKnown RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 FDXACB1Q9BRP7 624 aaPredicted RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 DUSP16Q9BY84 665 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 ZCWPW1Q9H0M4 648 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 COQ10BQ9H8M1 238 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 XPR1Q9UBH6 696 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 FAM95CA0A1B0GW59 222 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 SDHDO14521 159 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 GIPC1O14908 333 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 TRIM24O15164 1050 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 HTRA2O43464 458 aaPredicted RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 AKAP10O43572 662 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 NRP2O60462 931 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 RNASEH2AO75792 299 aaKnown RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 ADRA1BP35368 520 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 CSRP3P50461 194 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 ATP6V0D1P61421 351 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 PDCD4Q53EL6 469 aaKnown RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 IL23RQ5VWK5 629 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 TIGD7Q6NT04 549 aaPredicted RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 NOTUMQ6P988 496 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 ABRAXAS1Q6UWZ7 409 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 KDM1BQ8NB78 822 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms