RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 PAK4O96013 591 aaPredicted RBP13.77□□□□□ -0.21
CHD3-209ENST00000473376 HTR7P34969 479 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 NUMBP49757 651 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 YBEYP58557 167 aaPredicted RBP13.77□□□□□ -0.21
CHD3-209ENST00000473376 ERVPABLB-1P60509 514 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 PFN3P60673 137 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 YPEL5P62699 121 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 FMO1Q01740 532 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 RAD51Q06609 339 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 PTK2BQ14289 1009 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 FZD2Q14332 565 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 GRM3Q14832 879 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 TBC1D25Q3MII6 688 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 CCDC14Q49A88 953 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 FKBP15Q5T1M5 1219 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 CDKAL1Q5VV42 579 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 TAF3Q5VWG9 929 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 SEL1L3Q68CR1 1132 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 ZCCHC8Q6NZY4 707 aaKnown RBP13.77□□□□□ -0.21
CHD3-209ENST00000473376 PHF13Q86YI8 300 aaPredicted RBP13.77□□□□□ -0.21
CHD3-209ENST00000473376 DOCK4Q8N1I0 1966 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 SDR16C5Q8N3Y7 309 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 WDR48Q8TAF3 677 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 RXFP2Q8WXD0 754 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 DEPDC7Q96QD5 511 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 KLF6Q99612 283 aaPredicted RBP13.77□□□□□ -0.21
CHD3-209ENST00000473376 C1QTNF7Q9BXJ2 289 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 CALN1Q9BXU9 219 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 PRORYQ9H606 182 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 SAMSN1Q9NSI8 373 aaKnown RBP13.77□□□□□ -0.21
CHD3-209ENST00000473376 UCKL1Q9NWZ5 548 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 DKK3Q9UBP4 350 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 SNX10Q9Y5X0 201 aa13.77□□□□□ -0.21
CHD3-209ENST00000473376 GOLGA8SH3BPF8 625 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 K7ESM1 405 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 PES1O00541 588 aaKnown RBP13.76□□□□□ -0.21
CHD3-209ENST00000473376 AREL1O15033 823 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 RAMP2O60895 175 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 SDC3O75056 442 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 LRIG2O94898 1065 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 CALB1P05937 261 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 PLEKP08567 350 aaPredicted RBP13.76□□□□□ -0.21
CHD3-209ENST00000473376 KRT3P12035 628 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 STAT1P42224 750 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 MLLT3P42568 568 aaPredicted RBP13.76□□□□□ -0.21
CHD3-209ENST00000473376 LSSP48449 732 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 ATP11AP98196 1134 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 SEMG2Q02383 582 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 FGL2Q14314 439 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 MYLK3Q32MK0 819 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 PPP1R2P3Q6NXS1 205 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 PARS2Q7L3T8 475 aaKnown RBP13.76□□□□□ -0.21
CHD3-209ENST00000473376 C3orf20Q8ND61 904 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 CENPTQ96BT3 561 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 TBC1D31Q96DN5 1066 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 APOLD1Q96LR9 279 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 CPEB1Q9BZB8 566 aaKnown RBP13.76□□□□□ -0.21
CHD3-209ENST00000473376 METTL5Q9NRN9 209 aaKnown RBP13.76□□□□□ -0.21
CHD3-209ENST00000473376 TMPRSS4Q9NRS4 437 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 NEU3Q9UQ49 428 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 CA5BQ9Y2D0 317 aa13.76□□□□□ -0.21
CHD3-209ENST00000473376 CELSR3Q9NYQ7 3312 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 TEX51A0A1B0GUA7 166 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 POM121BA6NF01 834 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 CAPN8A6NHC0 703 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 SIGLEC16A6NMB1 481 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 C16orf96A6NNT2 1141 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 WASH4PA8MWX3 477 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 EIF3CLB5ME19 914 aaKnown RBP13.75□□□□□ -0.21
CHD3-209ENST00000473376 RNF103O00237 685 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 TLX3O43711 291 aaPredicted RBP13.75□□□□□ -0.21
CHD3-209ENST00000473376 GFPT2O94808 682 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 CHRNB2P17787 502 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 NSFP46459 744 aaKnown RBP13.75□□□□□ -0.21
CHD3-209ENST00000473376 PEX5P50542 639 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 UCNP55089 124 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 HDAC4P56524 1084 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 CLDN2P57739 230 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 C1QBPQ07021 282 aaKnown RBP13.75□□□□□ -0.21
CHD3-209ENST00000473376 PTP4A2Q12974 167 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 RBM43Q6ZSC3 357 aaKnown RBP13.75□□□□□ -0.21
CHD3-209ENST00000473376 PTAR1Q7Z6K3 402 aaPredicted RBP13.75□□□□□ -0.21
CHD3-209ENST00000473376 DRC7Q8IY82 874 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 EMC1Q8N766 993 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 ZNF248Q8NDW4 579 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 ZNF548Q8NEK5 533 aaPredicted RBP13.75□□□□□ -0.21
CHD3-209ENST00000473376 KLK6Q92876 244 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 VOPP1Q96AW1 172 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 EIF3CQ99613 913 aaKnown RBP13.75□□□□□ -0.21
CHD3-209ENST00000473376 TTYH3Q9C0H2 523 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 DNAJC28Q9NX36 388 aa13.75□□□□□ -0.21
CHD3-209ENST00000473376 FCF1Q9Y324 198 aaKnown RBP13.75□□□□□ -0.21
CHD3-209ENST00000473376 LY6G6EA0A0G2JKS1 128 aa13.74□□□□□ -0.21
CHD3-209ENST00000473376 EME2A4GXA9 379 aaPredicted RBP13.74□□□□□ -0.21
CHD3-209ENST00000473376 EIF4E1BA6NMX2 242 aaKnown RBP13.74□□□□□ -0.21
CHD3-209ENST00000473376 TMEM110-MUSTN1A8MSY1 372 aa13.74□□□□□ -0.21
CHD3-209ENST00000473376 ATXN7O15265 892 aaPredicted RBP13.74□□□□□ -0.21
CHD3-209ENST00000473376 BRINP1O60477 761 aa13.74□□□□□ -0.21
CHD3-209ENST00000473376 TCEA3O75764 348 aa13.74□□□□□ -0.21
CHD3-209ENST00000473376 CCDC172P0C7W6 258 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms